RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 PDLIM7Q9NR12 457 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 MRPL11Q9Y3B7 192 aaKnown RBP12.64□□□□□ -0.39
NEPRO-224ENST00000496340 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 CDC27P30260 824 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 PSMC6P62333 389 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 LY6KQ17RY6 165 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 APOA5Q6Q788 366 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 NFXL1Q6ZNB6 911 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
NEPRO-224ENST00000496340 RMDN3Q96TC7 470 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 USP26Q9BXU7 913 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 PXMP2Q9NR77 195 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 ADD3Q9UEY8 706 aaKnown RBP12.63□□□□□ -0.39
NEPRO-224ENST00000496340 TELO2Q9Y4R8 837 aa12.63□□□□□ -0.39
NEPRO-224ENST00000496340 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 MEIS2O14770 477 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 PQBP1O60828 265 aaKnown RBP12.62□□□□□ -0.39
NEPRO-224ENST00000496340 SLC34A2O95436 690 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 EPHB4P54760 987 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 SP2Q02086 613 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 PDE4DQ08499 809 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 FSCN1Q16658 493 aaKnown RBP12.62□□□□□ -0.39
NEPRO-224ENST00000496340 USP17L6PQ6QN14 398 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 TMTC3Q6ZXV5 915 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
NEPRO-224ENST00000496340 PDCD2LQ9BRP1 358 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 STARD7Q9NQZ5 370 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 PNMA2Q9UL42 364 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 SLC12A7Q9Y666 1083 aa12.62□□□□□ -0.39
NEPRO-224ENST00000496340 KIAA1217Q5T5P2 1943 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 LOC102724159A0A0B4J2E5 919 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 NR3C2P08235 984 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 BMP8BP34820 402 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 MRPS9P82933 396 aaKnown RBP12.61□□□□□ -0.39
NEPRO-224ENST00000496340 APOBRQ0VD83 1088 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 PWP2Q15269 919 aaKnown RBP12.61□□□□□ -0.39
NEPRO-224ENST00000496340 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 ERICH6BQ5W0A0 696 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 SEPT14Q6ZU15 432 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 ANKRD33Q7Z3H0 272 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 FCHSD1Q86WN1 690 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 MCF2L2Q86YR7 1114 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 SLC43A3Q8NBI5 491 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
NEPRO-224ENST00000496340 NSUN6Q8TEA1 469 aaKnown RBP12.61□□□□□ -0.39
NEPRO-224ENST00000496340 BADQ92934 168 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 LARP6Q9BRS8 491 aaKnown RBP12.61□□□□□ -0.39
NEPRO-224ENST00000496340 Q9Y3F1 56 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 CDH23Q9H251 3354 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
NEPRO-224ENST00000496340 KLF18A0A0U1RQI7 1052 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 ARVCFO00192 962 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 SORBS3O60504 671 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 PPFIA3O75145 1194 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 SEC24BO95487 1268 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 TXNP10599 105 aaKnown RBP12.6□□□□□ -0.39
NEPRO-224ENST00000496340 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 ADD1P35611 737 aaKnown RBP12.6□□□□□ -0.39
NEPRO-224ENST00000496340 ARHGAP1Q07960 439 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 SEMA3FQ13275 785 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 PGM5Q15124 567 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 C9orf50Q5SZB4 431 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 ARHGEF16Q5VV41 709 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 Q6ZUG5 572 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 VSIG10LQ86VR7 867 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 PCSK9Q8NBP7 692 aaKnown RBP12.6□□□□□ -0.39
NEPRO-224ENST00000496340 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
NEPRO-224ENST00000496340 DDX41Q9UJV9 622 aaKnown RBP12.6□□□□□ -0.39
NEPRO-224ENST00000496340 ELP1O95163 1332 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 UMODL1Q5DID0 1318 aa12.6□□□□□ -0.39
NEPRO-224ENST00000496340 A6NJR5 290 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 GCOM1H8Y6P7 765 aaPredicted RBP12.59□□□□□ -0.39
NEPRO-224ENST00000496340 DTNBO60941 627 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 CD4P01730 458 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 POLR2MP0CAP2 368 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 MYCLP12524 364 aaPredicted RBP12.59□□□□□ -0.39
NEPRO-224ENST00000496340 RPS6KB1P23443 525 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 KIF5BP33176 963 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 PURAQ00577 322 aaKnown RBP12.59□□□□□ -0.39
NEPRO-224ENST00000496340 TOB2Q14106 344 aaPredicted RBP12.59□□□□□ -0.39
NEPRO-224ENST00000496340 STXBP2Q15833 593 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 UBE2SQ16763 222 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 WWC2Q6AWC2 1192 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 OR6J1Q8NGC5 347 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 SCFD2Q8WU76 684 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 AFG1LQ8WV93 481 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 BRF1Q92994 677 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 VWCEQ96DN2 955 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
NEPRO-224ENST00000496340 IWS1Q96ST2 819 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
NEPRO-224ENST00000496340 UBE2OQ9C0C9 1292 aaKnown RBP12.59□□□□□ -0.39
NEPRO-224ENST00000496340 MAF1Q9H063 256 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms