RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 CENPFP49454 3210 aa15.46■□□□□ 0.06
PTPN7-218ENST00000496197 VPS37CA5D8V6 355 aaPredicted RBP15.46■□□□□ 0.06
PTPN7-218ENST00000496197 EIF2AK2P19525 551 aaKnown RBP15.46■□□□□ 0.06
PTPN7-218ENST00000496197 CTCFP49711 727 aaPredicted RBP15.46■□□□□ 0.06
PTPN7-218ENST00000496197 ALDH5A1P51649 535 aaPredicted RBP15.46■□□□□ 0.06
PTPN7-218ENST00000496197 FAM177A1Q8N128 213 aaPredicted RBP15.46■□□□□ 0.06
PTPN7-218ENST00000496197 MAML3Q96JK9 1138 aa15.46■□□□□ 0.06
PTPN7-218ENST00000496197 ANO3Q9BYT9 981 aa15.46■□□□□ 0.06
PTPN7-218ENST00000496197 PXMP2Q9NR77 195 aa15.46■□□□□ 0.06
PTPN7-218ENST00000496197 MAP3K20Q9NYL2 800 aaKnown RBP15.46■□□□□ 0.06
PTPN7-218ENST00000496197 KIF3AQ9Y496 699 aa15.46■□□□□ 0.06
PTPN7-218ENST00000496197 WNT7AO00755 349 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 STX6O43752 255 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 IGHA2P01877 340 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 HOXC6P09630 235 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 GALNT17Q6IS24 598 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 DPP9Q86TI2 863 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 SAMD3Q8N6K7 520 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 CRYGNQ8WXF5 182 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 SOCS4Q8WXH5 440 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 IPO9Q96P70 1041 aaKnown RBP15.45■□□□□ 0.06
PTPN7-218ENST00000496197 RMDN3Q96TC7 470 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 ZDHHC9Q9Y397 364 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 TRIM17Q9Y577 477 aa15.45■□□□□ 0.06
PTPN7-218ENST00000496197 H3BQV1 296 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 RGS2P41220 211 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 PGM5Q15124 567 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 IFFO2Q5TF58 517 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 FOXD4L5Q5VV16 416 aaPredicted RBP15.44■□□□□ 0.06
PTPN7-218ENST00000496197 PIK3AP1Q6ZUJ8 805 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 FERMT3Q86UX7 667 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 BICD2Q8TD16 824 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 FOXD4L4Q8WXT5 416 aaPredicted RBP15.44■□□□□ 0.06
PTPN7-218ENST00000496197 TRIB2Q92519 343 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 APBA2Q99767 749 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 PDCD2LQ9BRP1 358 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 MAF1Q9H063 256 aa15.44■□□□□ 0.06
PTPN7-218ENST00000496197 SPDYE3A6NKU9 549 aa15.43■□□□□ 0.06
PTPN7-218ENST00000496197 PDCP20941 246 aa15.43■□□□□ 0.06
PTPN7-218ENST00000496197 EDNRBP24530 442 aa15.43■□□□□ 0.06
PTPN7-218ENST00000496197 U2AF2P26368 475 aaKnown RBP eCLIP15.43■□□□□ 0.06
PTPN7-218ENST00000496197 AP3B2Q13367 1082 aa15.43■□□□□ 0.06
PTPN7-218ENST00000496197 MCTP1Q6DN14 999 aa15.43■□□□□ 0.06
PTPN7-218ENST00000496197 DNERQ8NFT8 737 aa15.43■□□□□ 0.06
PTPN7-218ENST00000496197 GLT8D2Q9H1C3 349 aa15.43■□□□□ 0.06
PTPN7-218ENST00000496197 FOXP1Q9H334 677 aaPredicted RBP15.43■□□□□ 0.06
PTPN7-218ENST00000496197 PTCH2Q9Y6C5 1203 aa15.43■□□□□ 0.06
PTPN7-218ENST00000496197 ELNP15502 786 aa15.42■□□□□ 0.06
PTPN7-218ENST00000496197 SREBF1P36956 1147 aa15.42■□□□□ 0.06
PTPN7-218ENST00000496197 MRPS9P82933 396 aaKnown RBP15.42■□□□□ 0.06
PTPN7-218ENST00000496197 TRIM32Q13049 653 aa15.42■□□□□ 0.06
PTPN7-218ENST00000496197 RESTQ13127 1097 aa15.42■□□□□ 0.06
PTPN7-218ENST00000496197 INF2Q27J81 1249 aa15.42■□□□□ 0.06
PTPN7-218ENST00000496197 ARHGEF16Q5VV41 709 aa15.42■□□□□ 0.06
PTPN7-218ENST00000496197 TBCKQ8TEA7 893 aa15.42■□□□□ 0.06
PTPN7-218ENST00000496197 DIS3Q9Y2L1 958 aaKnown RBP15.42■□□□□ 0.06
PTPN7-218ENST00000496197 TCHHQ07283 1943 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 SNAI1O95863 264 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-218ENST00000496197 GNRH1P01148 92 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 IRF5Q13568 498 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 SAFBQ15424 915 aaKnown RBP eCLIP15.41■□□□□ 0.06
PTPN7-218ENST00000496197 FAM173BQ6P4H8 233 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 MAMDC4Q6UXC1 1216 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 ARMCX2Q7L311 632 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 KRT25Q7Z3Z0 450 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 ZNF467Q7Z7K2 595 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-218ENST00000496197 NOSTRINQ8IVI9 506 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 MORC4Q8TE76 937 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 NSUN6Q8TEA1 469 aaKnown RBP15.41■□□□□ 0.06
PTPN7-218ENST00000496197 KATNBL1Q9H079 304 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 BRMS1Q9HCU9 246 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 FRMPD3Q5JV73 1810 aa15.41■□□□□ 0.06
PTPN7-218ENST00000496197 CCDC194A0A1B0GVG4 234 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 RGS20O76081 388 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 BRD1O95696 1058 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 FOSP01100 380 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-218ENST00000496197 NR3C2P08235 984 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 MYCLP12524 364 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-218ENST00000496197 XRCC5P13010 732 aaKnown RBP15.4■□□□□ 0.06
PTPN7-218ENST00000496197 CYP2C19P33261 490 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 ARHGAP4P98171 946 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 NBR1Q14596 966 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 NONOQ15233 471 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTPN7-218ENST00000496197 EEPD1Q7L9B9 569 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 TEX2Q8IWB9 1127 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 CYP2W1Q8TAV3 490 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 TINF2Q9BSI4 451 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 ADD3Q9UEY8 706 aaKnown RBP15.4■□□□□ 0.06
PTPN7-218ENST00000496197 PTPN22Q9Y2R2 807 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 ZSCAN22P10073 491 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-218ENST00000496197 HOXD10P28358 340 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 TOB1P50616 345 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-218ENST00000496197 PRAMEF19Q5SWL8 479 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 TMEM63BQ5T3F8 832 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 OLFML2BQ68BL8 750 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 VSIG10LQ86VR7 867 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 FBXO16Q8IX29 292 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-218ENST00000496197 CHAMP1Q96JM3 812 aa15.4■□□□□ 0.06
PTPN7-218ENST00000496197 RTEL1Q9NZ71 1219 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms