RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	GLT1D1	Q96MS3	346 aa		12.7	□□□□□ -0.38
DCTN1-223	ENST00000495643	IWS1	Q96ST2	819 aa		12.7	□□□□□ -0.38
DCTN1-223	ENST00000495643	RMDN3	Q96TC7	470 aa		12.7	□□□□□ -0.38
DCTN1-223	ENST00000495643	LZTS2	Q9BRK4	669 aa		12.7	□□□□□ -0.38
DCTN1-223	ENST00000495643	AP5M1	Q9H0R1	490 aa		12.7	□□□□□ -0.38
DCTN1-223	ENST00000495643	LAMA3	Q16787	3333 aa		12.7	□□□□□ -0.38
DCTN1-223	ENST00000495643	SZT2	Q5T011	3432 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	TRIM43B	A6NCK2	446 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	PLEKHA8P1	O95397	391 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	CALM1	P0DP23	149 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	CALM2	P0DP24	149 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	CALM3	P0DP25	149 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	RXRA	P19793	462 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	GNAQ	P50148	359 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	FAAP100	Q0VG06	881 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	KRT32	Q14532	448 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	CCDC62	Q6P9F0	684 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	SRBD1	Q8N5C6	995 aa	Known RBP	12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	SCFD2	Q8WU76	684 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	TOX2	Q96NM4	488 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	PXMP2	Q9NR77	195 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	PRKAG2	Q9UGJ0	569 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643	SLC12A7	Q9Y666	1083 aa		12.69	□□□□□ -0.38
DCTN1-223	ENST00000495643		A0A0U1RQG5	324 aa	Predicted RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	ARVCF	O00192	962 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	KIAA0355	O15063	1070 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	NKRF	O15226	690 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	PQBP1	O60828	265 aa	Known RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	CABYR	O75952	493 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	ARIH2	O95376	493 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	NR3C2	P08235	984 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	CLTB	P09497	229 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	ITGB8	P26012	769 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	HOXA13	P31271	388 aa	Predicted RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	HSPA4	P34932	840 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	PPP2R5B	Q15173	497 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	STXBP2	Q15833	593 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	ARHGEF16	Q5VV41	709 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	APOA5	Q6Q788	366 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	CXCL17	Q6UXB2	119 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	RAB11FIP4	Q86YS3	637 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	CMTR1	Q8N1G2	835 aa	Known RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	FANCB	Q8NB91	859 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	SLC43A3	Q8NBI5	491 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	PIBF1	Q8WXW3	757 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	VTI1A	Q96AJ9	217 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	RRP36	Q96EU6	259 aa	Known RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	TCEANC2	Q96MN5	208 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	UBE2O	Q9C0C9	1292 aa	Known RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	SNX14	Q9Y5W7	946 aa		12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	LAMA2	P24043	3122 aa	Known RBP	12.68	□□□□□ -0.38
DCTN1-223	ENST00000495643	GRIN2D	O15399	1336 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	MROH7	Q68CQ1	1323 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	DCDC2C	A8MYV0	355 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	ZEB2	O60315	1214 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	EIF3J	O75822	258 aa	Known RBP	12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	CENPB	P07199	599 aa	Predicted RBP	12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	HMGB1	P09429	215 aa	Known RBP	12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	POLR2M	P0CAP2	368 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	TXN	P10599	105 aa	Known RBP	12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	EIF2AK2	P19525	551 aa	Known RBP	12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	TTLL4	Q14679	1199 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	SEPT14	Q6ZU15	432 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	TMTC3	Q6ZXV5	915 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	TDH	Q8IZJ6	230 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	COPS5	Q92905	334 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	PDCD2L	Q9BRP1	358 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	BRPF3	Q9ULD4	1205 aa		12.67	□□□□□ -0.38
DCTN1-223	ENST00000495643	MYH7B	A7E2Y1	1941 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643		A6NJR5	290 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	SOX1	O00570	391 aa	Predicted RBP	12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	EPB41L2	O43491	1005 aa	Known RBP	12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	REC8	O95072	547 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	CPT1A	P50416	773 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	PURA	Q00577	322 aa	Known RBP	12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	PGM5	Q15124	567 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	VSIG10L	Q86VR7	867 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	MICU3	Q86XE3	530 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	OR6J1	Q8NGC5	347 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	BAD	Q92934	168 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	TMEM39A	Q9NV64	488 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	POLR3E	Q9NVU0	708 aa		12.66	□□□□□ -0.38
DCTN1-223	ENST00000495643	FRMPD4	Q14CM0	1322 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	SCN10A	Q9Y5Y9	1956 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	RGS20	O76081	388 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	CD4	P01730	458 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	CPA1	P15085	419 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	PSMC6	P62333	389 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	ARHGAP1	Q07960	439 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	FUT2	Q10981	343 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	ITGA7	Q13683	1181 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	LY6K	Q17RY6	165 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	LRIT3	Q3SXY7	679 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	SYNE3	Q6ZMZ3	975 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	FAM126B	Q8IXS8	530 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	CCDC82	Q8N4S0	544 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms