RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
RPRD1B-206ENST00000495457 GPR153Q6NV75 609 aa16.56■□□□□ 0.24
RPRD1B-206ENST00000495457 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
RPRD1B-206ENST00000495457 DEFB123Q8N688 67 aa16.56■□□□□ 0.24
RPRD1B-206ENST00000495457 NSUN6Q8TEA1 469 aaKnown RBP16.56■□□□□ 0.24
RPRD1B-206ENST00000495457 SCFD2Q8WU76 684 aa16.56■□□□□ 0.24
RPRD1B-206ENST00000495457 MAF1Q9H063 256 aa16.56■□□□□ 0.24
RPRD1B-206ENST00000495457 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
RPRD1B-206ENST00000495457 B4DLN1 442 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 CD4P01730 458 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 MYL3P08590 195 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 TXNP10599 105 aaKnown RBP16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 EIF2AK2P19525 551 aaKnown RBP16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 HSD17B4P51659 736 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 MRPL12P52815 198 aaKnown RBP16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 FPGSQ05932 587 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 ARHGEF16Q5VV41 709 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 SEPT14Q6ZU15 432 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 PIBF1Q8WXW3 757 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 PPP1R12CQ9BZL4 782 aa16.55■□□□□ 0.24
RPRD1B-206ENST00000495457 SH2B2O14492 632 aaPredicted RBP16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 NKRFO15226 690 aaKnown RBP eCLIP16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 TLR3O15455 904 aaKnown RBP16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 HOXA13P31271 388 aaPredicted RBP16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 MCM5P33992 734 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 CPT1AP50416 773 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 PURAQ00577 322 aaKnown RBP16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 GHRHRQ02643 423 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 TTLL4Q14679 1199 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 MFSD5Q6N075 450 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 CCDC62Q6P9F0 684 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 CASC1Q6TDU7 716 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 ZNF654Q8IZM8 581 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 PPP1R13LQ8WUF5 828 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 IWS1Q96ST2 819 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 TRPV6Q9H1D0 765 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 PXMP2Q9NR77 195 aa16.54■□□□□ 0.24
RPRD1B-206ENST00000495457 UMODL1Q5DID0 1318 aa16.53■□□□□ 0.24
RPRD1B-206ENST00000495457 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
RPRD1B-206ENST00000495457 B4GALT4O60513 344 aa16.53■□□□□ 0.24
RPRD1B-206ENST00000495457 RXRAP19793 462 aa16.53■□□□□ 0.24
RPRD1B-206ENST00000495457 STXBP2Q15833 593 aa16.53■□□□□ 0.24
RPRD1B-206ENST00000495457 LY6KQ17RY6 165 aa16.53■□□□□ 0.24
RPRD1B-206ENST00000495457 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
RPRD1B-206ENST00000495457 POLR3EQ9NVU0 708 aa16.53■□□□□ 0.24
RPRD1B-206ENST00000495457 A6NJR5 290 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 DDAH1O94760 285 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 NR3C2P08235 984 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 CSF2RAP15509 400 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 CYP2C18P33260 490 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 TMEM87BQ96K49 555 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 RNPC3Q96LT9 517 aaKnown RBP16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 PDCD2LQ9BRP1 358 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 MTG1Q9BT17 334 aaPredicted RBP16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 MTA3Q9BTC8 594 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 MTMR10Q9NXD2 777 aa16.52■□□□□ 0.24
RPRD1B-206ENST00000495457 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 BRDTQ58F21 947 aaPredicted RBP16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 C16orf59Q7L2K0 433 aa16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 AFG1LQ8WV93 481 aa16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.51■□□□□ 0.231e-15■□□□□ 9
RPRD1B-206ENST00000495457 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 HIPK3Q9H422 1215 aa16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 MAP3K20Q9NYL2 800 aaKnown RBP16.51■□□□□ 0.23
RPRD1B-206ENST00000495457 GCOM1H8Y6P7 765 aaPredicted RBP16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 CDC45O75419 566 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 EIF3JO75822 258 aaKnown RBP16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 GH1P01241 217 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 POLR2MP0CAP2 368 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 ACRP10323 421 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 KIF5BP33176 963 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 ARHGAP1Q07960 439 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 NBPF20Q3BBV1 942 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 FCHSD1Q86WN1 690 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 TMEM199Q8N511 208 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 FAM161BQ96MY7 647 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 SPZ1Q9BXG8 430 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 SEZ6LQ9BYH1 1024 aa16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 DDX41Q9UJV9 622 aaKnown RBP16.5■□□□□ 0.23
RPRD1B-206ENST00000495457 LAMA2P24043 3122 aaKnown RBP16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 RGS20O76081 388 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 MMP3P08254 477 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 CYP2C9P11712 490 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 LIFRP42702 1097 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 CCL23P55773 120 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 TRAF1Q13077 416 aa16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 PPIGQ13427 754 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPRD1B-206ENST00000495457 PGM5Q15124 567 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms