RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 TXNDC11Q6PKC3 985 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 PI4K2BQ8TCG2 481 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 ZNF512BQ96KM6 892 aaPredicted RBP9.08□□□□□ -0.96
RPGR-210ENST00000494841 DNAJC2Q99543 621 aaKnown RBP9.08□□□□□ -0.96
RPGR-210ENST00000494841 ANTXR1Q9H6X2 564 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 ABCF2Q9UG63 623 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 TMEM238LA0A1B0GVL6 79 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 GLTPD2A6NH11 291 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 SPDYE3A6NKU9 549 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 H3BRJ5 948 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 DEAF1O75398 565 aaPredicted RBP9.07□□□□□ -0.96
RPGR-210ENST00000494841 RGS3P49796 1198 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 GMPSP49915 693 aaPredicted RBP9.07□□□□□ -0.96
RPGR-210ENST00000494841 MFSD14BQ5SR56 506 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 FMR1NBQ8N0W7 255 aaPredicted RBP9.07□□□□□ -0.96
RPGR-210ENST00000494841 GPC2Q8N158 579 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 DTWD1Q8N5C7 304 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 WDR66Q8TBY9 1149 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 GPATCH3Q96I76 525 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 PIH1D3Q9NQM4 214 aaKnown RBP9.07□□□□□ -0.96
RPGR-210ENST00000494841 STAP2Q9UGK3 403 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 PARP2Q9UGN5 583 aa9.07□□□□□ -0.96
RPGR-210ENST00000494841 TTC41PQ6P2S7 1318 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 LINC01387J3KSC0 135 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 GOLIM4O00461 696 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 GIPC1O14908 333 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 PRDX5P30044 214 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 CDC25BP30305 580 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 EPS15P42566 896 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 GSK3AP49840 483 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 RAC1P63000 192 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 FRMD6Q96NE9 622 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 GMLQ99445 158 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 HAUS7Q99871 368 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 ZNF576Q9H609 170 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 C12orf49Q9H741 205 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 CNOT7Q9UIV1 285 aaKnown RBP9.06□□□□□ -0.96
RPGR-210ENST00000494841 PCDHAC2Q9Y5I4 1007 aa9.06□□□□□ -0.96
RPGR-210ENST00000494841 TM4SF5O14894 197 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 ERC2O15083 957 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 GLRX3O76003 335 aaKnown RBP9.05□□□□□ -0.96
RPGR-210ENST00000494841 CHGBP05060 677 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 ZNF16P17020 682 aaPredicted RBP9.05□□□□□ -0.96
RPGR-210ENST00000494841 FCGRTP55899 365 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 FKBP1AP62942 108 aaKnown RBP9.05□□□□□ -0.96
RPGR-210ENST00000494841 SETDB1Q15047 1291 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 C3orf58Q8NDZ4 430 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.05□□□□□ -0.96
RPGR-210ENST00000494841 TBC1D22AQ8WUA7 517 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 PAG1Q9NWQ8 432 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 LRP2BPQ9P2M1 347 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 TTF2Q9UNY4 1162 aaKnown RBP9.05□□□□□ -0.96
RPGR-210ENST00000494841 PDS5AQ29RF7 1337 aaKnown RBP9.05□□□□□ -0.96
RPGR-210ENST00000494841 SALL1Q9NSC2 1324 aa9.05□□□□□ -0.96
RPGR-210ENST00000494841 IDH1O75874 414 aaKnown RBP9.04□□□□□ -0.96
RPGR-210ENST00000494841 YY1P25490 414 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 DAB2P98082 770 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 MECOMQ03112 1051 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 TBC1D10BQ4KMP7 808 aaPredicted RBP9.04□□□□□ -0.96
RPGR-210ENST00000494841 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 FBXO11Q86XK2 927 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 AGBL3Q8NEM8 1001 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 ZNF384Q8TF68 577 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 FOXD4L4Q8WXT5 416 aaPredicted RBP9.04□□□□□ -0.96
RPGR-210ENST00000494841 DPF2Q92785 391 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 RILPL2Q969X0 211 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 FAM161BQ96MY7 647 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 CLEC4MQ9H2X3 399 aaPredicted RBP9.04□□□□□ -0.96
RPGR-210ENST00000494841 SRA1Q9HD15 236 aaKnown RBP9.04□□□□□ -0.96
RPGR-210ENST00000494841 NMRK2Q9NPI5 230 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 GPRC5DQ9NZD1 345 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 RAI14Q9P0K7 980 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 ADAMTSL1Q8N6G6 1762 aa9.04□□□□□ -0.96
RPGR-210ENST00000494841 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 RBM47A0AV96 593 aaKnown RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 H7C1D1 291 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 FSCN2O14926 492 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 SPATA31C1P0DKV0 1188 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 GSPT1P15170 499 aaKnown RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 RPS12P25398 132 aaKnown RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 CRKP46108 304 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 RBM5P52756 815 aaKnown RBP eCLIP9.03□□□□□ -0.96
RPGR-210ENST00000494841 PCDH1Q08174 1060 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 KCNMA1Q12791 1236 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 IKBKEQ14164 716 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 TTF1Q15361 905 aaPredicted RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 TTC22Q5TAA0 569 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 SPTY2D1Q68D10 685 aaPredicted RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 DZIP1Q86YF9 867 aaKnown RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 MAP4K3Q8IVH8 894 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 ZGPATQ8N5A5 531 aaKnown RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 MAGEB6Q8N7X4 407 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 GALNT11Q8NCW6 608 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 NSUN4Q96CB9 384 aaKnown RBP9.03□□□□□ -0.96
RPGR-210ENST00000494841 AK5Q9Y6K8 562 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 AOX1Q06278 1338 aa9.03□□□□□ -0.96
RPGR-210ENST00000494841 MYO3BQ8WXR4 1341 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms