RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 TMEM87BQ96K49 555 aa18.12■□□□□ 0.49
LIMS2-216ENST00000494613 MAP3K14Q99558 947 aa18.12■□□□□ 0.49
LIMS2-216ENST00000494613 MAP3K20Q9NYL2 800 aaKnown RBP18.12■□□□□ 0.49
LIMS2-216ENST00000494613 MROH7Q68CQ1 1323 aa18.12■□□□□ 0.49
LIMS2-216ENST00000494613 LCTP09848 1927 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 SZT2Q5T011 3432 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 NKRFO15226 690 aaKnown RBP eCLIP18.11■□□□□ 0.49
LIMS2-216ENST00000494613 TIMP1P01033 207 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 HSD17B4P51659 736 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 TRAF1Q13077 416 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 STXBP2Q15833 593 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 C9orf50Q5SZB4 431 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 SEPT14Q6ZU15 432 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 ZNF654Q8IZM8 581 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 SAMD3Q8N6K7 520 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 MYL10Q9BUA6 226 aa18.11■□□□□ 0.49
LIMS2-216ENST00000494613 ARIH2O95376 493 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 CD4P01730 458 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 NR3C2P08235 984 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 LIFRP42702 1097 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 EPHB4P54760 987 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 PSMC6P62333 389 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 GHRHRQ02643 423 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 PPP2R5BQ15173 497 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 GPR153Q6NV75 609 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 CCDC62Q6P9F0 684 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 FAM126BQ8IXS8 530 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 OR6J1Q8NGC5 347 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 PIBF1Q8WXW3 757 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 TBX21Q9UL17 535 aa18.1■□□□□ 0.49
LIMS2-216ENST00000494613 CCDC69A6NI79 296 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 SH2B2O14492 632 aaPredicted RBP18.09■□□□□ 0.49
LIMS2-216ENST00000494613 TLR3O15455 904 aaKnown RBP18.09■□□□□ 0.49
LIMS2-216ENST00000494613 EIF3JO75822 258 aaKnown RBP18.09■□□□□ 0.49
LIMS2-216ENST00000494613 MYL3P08590 195 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 EIF2AK2P19525 551 aaKnown RBP18.09■□□□□ 0.49
LIMS2-216ENST00000494613 SMARCA1P28370 1054 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 HOXA13P31271 388 aaPredicted RBP18.09■□□□□ 0.49
LIMS2-216ENST00000494613 CPT1AP50416 773 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 LY6KQ17RY6 165 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 CTCFLQ8NI51 663 aaPredicted RBP18.09■□□□□ 0.49
LIMS2-216ENST00000494613 SEZ6LQ9BYH1 1024 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 LRRC2Q9BYS8 371 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 PXMP2Q9NR77 195 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 POLR3EQ9NVU0 708 aa18.09■□□□□ 0.49
LIMS2-216ENST00000494613 A6NJR5 290 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 CDC45O75419 566 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 DDAH1O94760 285 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 KIF5BP33176 963 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 PURAQ00577 322 aaKnown RBP18.08■□□□□ 0.48
LIMS2-216ENST00000494613 TSGA10IPQ3SY00 556 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 RNF20Q5VTR2 975 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 MFSD5Q6N075 450 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.48
LIMS2-216ENST00000494613 NEK1Q96PY6 1258 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 LZTS2Q9BRK4 669 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 TRPV6Q9H1D0 765 aa18.08■□□□□ 0.48
LIMS2-216ENST00000494613 BAZ2BQ9UIF8 2168 aaKnown RBP18.08■□□□□ 0.48
LIMS2-216ENST00000494613 GCOM1H8Y6P7 765 aaPredicted RBP18.07■□□□□ 0.48
LIMS2-216ENST00000494613 KPNA6O60684 536 aa18.07■□□□□ 0.48
LIMS2-216ENST00000494613 POLR2MP0CAP2 368 aa18.07■□□□□ 0.48
LIMS2-216ENST00000494613 GNAQP50148 359 aa18.07■□□□□ 0.48
LIMS2-216ENST00000494613 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
LIMS2-216ENST00000494613 FPGSQ05932 587 aa18.07■□□□□ 0.48
LIMS2-216ENST00000494613 BRDTQ58F21 947 aaPredicted RBP18.07■□□□□ 0.48
LIMS2-216ENST00000494613 VSIG10LQ86VR7 867 aa18.07■□□□□ 0.48
LIMS2-216ENST00000494613 SPZ1Q9BXG8 430 aa18.07■□□□□ 0.48
LIMS2-216ENST00000494613 DDX41Q9UJV9 622 aaKnown RBP18.07■□□□□ 0.48
LIMS2-216ENST00000494613 MYCLP12524 364 aaPredicted RBP18.06■□□□□ 0.48
LIMS2-216ENST00000494613 RXRAP19793 462 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 ADCK5Q3MIX3 580 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 Q7L0L9 218 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 C16orf59Q7L2K0 433 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 FCHSD1Q86WN1 690 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 CMTR1Q8N1G2 835 aaKnown RBP18.06■□□□□ 0.48
LIMS2-216ENST00000494613 DEFB123Q8N688 67 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 FANCBQ8NB91 859 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 RRP36Q96EU6 259 aaKnown RBP18.06■□□□□ 0.48
LIMS2-216ENST00000494613 PDCD2LQ9BRP1 358 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 MTG1Q9BT17 334 aaPredicted RBP18.06■□□□□ 0.48
LIMS2-216ENST00000494613 SLC12A7Q9Y666 1083 aa18.06■□□□□ 0.48
LIMS2-216ENST00000494613 B4GALT4O60513 344 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 PLEKHA8P1O95397 391 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 GH1P01241 217 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 CALM1P0DP23 149 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 CALM2P0DP24 149 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 CALM3P0DP25 149 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 CYP2C18P33260 490 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 NBPF20Q3BBV1 942 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 DHX32Q7L7V1 743 aaKnown RBP18.05■□□□□ 0.48
LIMS2-216ENST00000494613 RAB11FIP4Q86YS3 637 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 CCDC82Q8N4S0 544 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 AFG1LQ8WV93 481 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 PPP1R12CQ9BZL4 782 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 ALDH8A1Q9H2A2 487 aaPredicted RBP18.05■□□□□ 0.48
LIMS2-216ENST00000494613 LAMA3Q16787 3333 aa18.05■□□□□ 0.48
LIMS2-216ENST00000494613 RGS20O76081 388 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms