RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 TCTN1Q2MV58 587 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 DUSP28Q4G0W2 176 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 TMEM67Q5HYA8 995 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 RPUSD2Q8IZ73 545 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 VTA1Q9NP79 307 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 GPCPD1Q9NPB8 672 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 TRIOO75962 3097 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 PTPDC1A2A3K4 754 aa13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 EPB41L2O43491 1005 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 MFAP1P55081 439 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 TKFCQ3LXA3 575 aa13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 OR6J1Q8NGC5 347 aa13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 MORC4Q8TE76 937 aa13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 FAM122AQ96E09 287 aa13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 ZNF287Q9HBT7 754 aa13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 SYNPO2Q9UMS6 1093 aa13.79□□□□□ -0.2
CSNK1E-212ENST00000494610 SCN10AQ9Y5Y9 1956 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 FAM86C2PA6NEL3 165 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 ARIH2O95376 493 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 ICAM1P05362 532 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 IQCF3P0C7M6 154 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 FDX1P10109 184 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 CHMLP26374 656 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 GPNMBQ14956 572 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 ZMYM1Q5SVZ6 1142 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 CLEC4DQ8WXI8 215 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 NACAP1Q9BZK3 213 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 FTOQ9C0B1 505 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 RANBP17Q9H2T7 1088 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 CPVLQ9H3G5 476 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 Q9Y3F1 56 aa13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 COL4A4P53420 1690 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-212ENST00000494610 TLL1O43897 1013 aa13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 LPXNO60711 386 aa13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 PLA2G6O60733 806 aa13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 GRB10Q13322 594 aa13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 HERC6Q8IVU3 1022 aa13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 LRFN3Q9BTN0 628 aa13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 TANC1Q9C0D5 1861 aa13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-212ENST00000494610 RBM47A0AV96 593 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 RRP12Q5JTH9 1297 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 SYDE2Q5VT97 1194 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 GDPD5Q8WTR4 605 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 TMEM47Q9BQJ4 181 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 ESYT1Q9BSJ8 1104 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 C11orf16Q9NQ32 467 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 POLR3EQ9NVU0 708 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 MTUS1Q9ULD2 1270 aa13.76□□□□□ -0.21
CSNK1E-212ENST00000494610 GTPBP6O43824 516 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-212ENST00000494610 SLC3A2P08195 630 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-212ENST00000494610 SUPT20HL2P0C7V6 817 aa13.75□□□□□ -0.21
CSNK1E-212ENST00000494610 CPT1AP50416 773 aa13.75□□□□□ -0.21
CSNK1E-212ENST00000494610 DEFB103AP81534 67 aa13.75□□□□□ -0.21
CSNK1E-212ENST00000494610 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-212ENST00000494610 HELLSQ9NRZ9 838 aa13.75□□□□□ -0.21
CSNK1E-212ENST00000494610 TOMM22Q9NS69 142 aa13.75□□□□□ -0.21
CSNK1E-212ENST00000494610 GOLGA8HP0CJ92 632 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 POU3F3P20264 500 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 NOVP48745 357 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 PDE4DQ08499 809 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 USH1GQ495M9 461 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 GDF6Q6KF10 455 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 FAM117BQ6P1L5 589 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 RNF207Q6ZRF8 634 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 DHX38Q92620 1227 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-212ENST00000494610 A6NJR5 290 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 SGSM2O43147 1006 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 SORBS3O60504 671 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 PFKMP08237 780 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 ACTN1P12814 892 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 HAND2P61296 217 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 PTGISQ16647 500 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 CWC27Q6UX04 472 aaKnown RBP13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 BTNL9Q6UXG8 535 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 RETREG2Q8NC44 543 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 AFG1LQ8WV93 481 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 WNT8BQ93098 351 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 HLA-CQ95604 372 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 FAM227BQ96M60 508 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 SLC9A7Q96T83 725 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 C1QTNF1Q9BXJ1 281 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 SEZ6LQ9BYH1 1024 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 UBA5Q9GZZ9 404 aa13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
CSNK1E-212ENST00000494610 MUC6Q6W4X9 2439 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 PDHBP11177 359 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 EDNRBP24530 442 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms