RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
TRIM59-206ENST00000494486 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
TRIM59-206ENST00000494486 PPP1R13LQ8WUF5 828 aa13.22□□□□□ -0.29
TRIM59-206ENST00000494486 CHAMP1Q96JM3 812 aa13.22□□□□□ -0.29
TRIM59-206ENST00000494486 ACAD9Q9H845 621 aa13.22□□□□□ -0.29
TRIM59-206ENST00000494486 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
TRIM59-206ENST00000494486 RAD50Q92878 1312 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 GRM6O15303 877 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 ZAP70P43403 619 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 RSPO4Q2I0M5 234 aaPredicted RBP13.21□□□□□ -0.29
TRIM59-206ENST00000494486 SESTD1Q86VW0 696 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 OR6J1Q8NGC5 347 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 TOP1MTQ969P6 601 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 ZNF512BQ96KM6 892 aaPredicted RBP13.21□□□□□ -0.29
TRIM59-206ENST00000494486 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 HAUS7Q99871 368 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 WDR11Q9BZH6 1224 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 RALYQ9UKM9 306 aaKnown RBP13.21□□□□□ -0.29
TRIM59-206ENST00000494486 RWDD3Q9Y3V2 267 aa13.21□□□□□ -0.29
TRIM59-206ENST00000494486 IDH1O75874 414 aaKnown RBP13.2□□□□□ -0.3
TRIM59-206ENST00000494486 CTNNB1P35222 781 aa13.2□□□□□ -0.3
TRIM59-206ENST00000494486 BMPR1AP36894 532 aa13.2□□□□□ -0.3
TRIM59-206ENST00000494486 EVX2Q03828 476 aa13.2□□□□□ -0.3
TRIM59-206ENST00000494486 MORC4Q8TE76 937 aa13.2□□□□□ -0.3
TRIM59-206ENST00000494486 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
TRIM59-206ENST00000494486 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
TRIM59-206ENST00000494486 MCM3APO60318 1980 aa13.2□□□□□ -0.3
TRIM59-206ENST00000494486 A6NJR5 290 aa13.19□□□□□ -0.3
TRIM59-206ENST00000494486 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
TRIM59-206ENST00000494486 ANGPT1Q15389 498 aa13.19□□□□□ -0.3
TRIM59-206ENST00000494486 GDF6Q6KF10 455 aaPredicted RBP13.19□□□□□ -0.3
TRIM59-206ENST00000494486 FIBCD1Q8N539 461 aa13.19□□□□□ -0.3
TRIM59-206ENST00000494486 KREMEN2Q8NCW0 462 aa13.19□□□□□ -0.3
TRIM59-206ENST00000494486 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
TRIM59-206ENST00000494486 NUP88Q99567 741 aaPredicted RBP13.19□□□□□ -0.3
TRIM59-206ENST00000494486 HINFPQ9BQA5 517 aa13.19□□□□□ -0.3
TRIM59-206ENST00000494486 RIOK1Q9BRS2 568 aaKnown RBP13.19□□□□□ -0.3
TRIM59-206ENST00000494486 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
TRIM59-206ENST00000494486 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
TRIM59-206ENST00000494486 HOMER2Q9NSB8 354 aa13.19□□□□□ -0.3
TRIM59-206ENST00000494486 EMSYQ7Z589 1322 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 CHD6Q8TD26 2715 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 RBM47A0AV96 593 aaKnown RBP13.18□□□□□ -0.3
TRIM59-206ENST00000494486 NKRFO15226 690 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRIM59-206ENST00000494486 SRGAP3O43295 1099 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 MMP1P03956 469 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 FDX1P10109 184 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 SUSD6Q92537 303 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 RUBCNQ92622 972 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 DYNLL2Q96FJ2 89 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 MFSD1Q9H3U5 465 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 SORCS3Q9UPU3 1222 aa13.18□□□□□ -0.3
TRIM59-206ENST00000494486 F5H6K3 240 aa13.17□□□□□ -0.3
TRIM59-206ENST00000494486 UPP2O95045 317 aa13.17□□□□□ -0.3
TRIM59-206ENST00000494486 CHMP4BP1P59074 171 aa13.17□□□□□ -0.3
TRIM59-206ENST00000494486 KLRC3Q07444 240 aa13.17□□□□□ -0.3
TRIM59-206ENST00000494486 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
TRIM59-206ENST00000494486 CYP2W1Q8TAV3 490 aa13.17□□□□□ -0.3
TRIM59-206ENST00000494486 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
TRIM59-206ENST00000494486 FEM1BQ9UK73 627 aa13.17□□□□□ -0.3
TRIM59-206ENST00000494486 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
TRIM59-206ENST00000494486 SCN10AQ9Y5Y9 1956 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 EP300Q09472 2414 aaPredicted RBP13.16□□□□□ -0.3
TRIM59-206ENST00000494486 MAGEB6P1A0A0J9YX57 407 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 CYP2D6P10635 497 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 CDK8P49336 464 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 ATXN1P54253 815 aaKnown RBP13.16□□□□□ -0.3
TRIM59-206ENST00000494486 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM59-206ENST00000494486 PTK7Q13308 1070 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 ZNF618Q5T7W0 954 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 TRAF7Q6Q0C0 670 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 CCDC105Q8IYK2 499 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 PLVAPQ9BX97 442 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
TRIM59-206ENST00000494486 GPR108Q9NPR9 543 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
TRIM59-206ENST00000494486 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
TRIM59-206ENST00000494486 E9PSI1 815 aa13.15□□□□□ -0.3
TRIM59-206ENST00000494486 BRD1O95696 1058 aa13.15□□□□□ -0.3
TRIM59-206ENST00000494486 NDUFB10O96000 172 aa13.15□□□□□ -0.3
TRIM59-206ENST00000494486 ADRB1P08588 477 aa13.15□□□□□ -0.3
TRIM59-206ENST00000494486 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
TRIM59-206ENST00000494486 PLEKHG4Q58EX7 1191 aa13.15□□□□□ -0.3
TRIM59-206ENST00000494486 LRRC47Q8N1G4 583 aaKnown RBP13.15□□□□□ -0.3
TRIM59-206ENST00000494486 DBNDD2Q9BQY9 259 aa13.15□□□□□ -0.3
TRIM59-206ENST00000494486 IFIH1Q9BYX4 1025 aaKnown RBP13.15□□□□□ -0.3
TRIM59-206ENST00000494486 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
TRIM59-206ENST00000494486 DNAH14Q0VDD8 3507 aa13.15□□□□□ -0.3
TRIM59-206ENST00000494486 DMDP11532 3685 aa13.15□□□□□ -0.31
TRIM59-206ENST00000494486 ZNF292O60281 2723 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 GLP2RO95838 553 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 LINC00271P0C7V0 271 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 HOXB3P14651 431 aaPredicted RBP13.14□□□□□ -0.31
TRIM59-206ENST00000494486 MTX1Q13505 466 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 CAMK1Q14012 370 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 TRIM71Q2Q1W2 868 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms