RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 C20orf204Q6ZNR8 217 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 CTU1Q7Z7A3 348 aaKnown RBP9.89□□□□□ -0.83
RIF1-211ENST00000494333 ZFPM1Q8IX07 1006 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 MICALL1Q8N3F8 863 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 PTPN18Q99952 460 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 DBNDD2Q9BQY9 259 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 ZNF341Q9BYN7 854 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 RAI14Q9P0K7 980 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 LRP2BPQ9P2M1 347 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 SALL4Q9UJQ4 1053 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 RCAN3Q9UKA8 241 aa9.89□□□□□ -0.83
RIF1-211ENST00000494333 CASP8AP2Q9UKL3 1982 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 GAKO14976 1311 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 M0R082 166 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 FKTNO75072 461 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 KIF4AO95239 1232 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 GHRHP01286 108 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 NEFLP07196 543 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 LDHCP07864 332 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 EIF2AK2P19525 551 aaKnown RBP9.88□□□□□ -0.83
RIF1-211ENST00000494333 BTDP43251 543 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 RGS3P49796 1198 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 GTF2A2P52657 109 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 NCAPG2Q86XI2 1143 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 ERO1BQ86YB8 467 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 ZNF417Q8TAU3 575 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 NUDT8Q8WV74 236 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 NSUN4Q96CB9 384 aaKnown RBP9.88□□□□□ -0.83
RIF1-211ENST00000494333 ZNF587Q96SQ5 575 aaPredicted RBP9.88□□□□□ -0.83
RIF1-211ENST00000494333 IDI2Q9BXS1 227 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 CCDC8Q9H0W5 538 aaPredicted RBP9.88□□□□□ -0.83
RIF1-211ENST00000494333 SNCAIPQ9Y6H5 919 aa9.88□□□□□ -0.83
RIF1-211ENST00000494333 MROH7-TTC4A0A0A0MT08 1334 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 GPR75-ASB3A0A0A6YYF3 556 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 CCL15-CCL14A0A0B4J2E2 113 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 ENTPD3O75355 529 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 WDHD1O75717 1129 aaPredicted RBP9.87□□□□□ -0.83
RIF1-211ENST00000494333 DGKGP49619 791 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 SNRPNP63162 240 aaKnown RBP9.87□□□□□ -0.83
RIF1-211ENST00000494333 GSTO1P78417 241 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 PLCB3Q01970 1234 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 PICALMQ13492 652 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 PKN2Q16513 984 aaKnown RBP9.87□□□□□ -0.83
RIF1-211ENST00000494333 CCL15Q16663 113 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 ELMSAN1Q6PJG2 1045 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 C8orf86Q6ZUL3 223 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 ZNF384Q8TF68 577 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 BRI3BPQ8WY22 251 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 EAF2Q96CJ1 260 aaPredicted RBP9.87□□□□□ -0.83
RIF1-211ENST00000494333 LPIN3Q9BQK8 851 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 STK17AQ9UEE5 414 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 DDX19BQ9UMR2 479 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 EXOC6BQ9Y2D4 811 aa9.87□□□□□ -0.83
RIF1-211ENST00000494333 RPAP1Q9BWH6 1393 aaPredicted RBP9.87□□□□□ -0.83
RIF1-211ENST00000494333 ECM29Q5VYK3 1845 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 DDTLA6NHG4 134 aaPredicted RBP9.86□□□□□ -0.83
RIF1-211ENST00000494333 POLR3DP05423 398 aaPredicted RBP9.86□□□□□ -0.83
RIF1-211ENST00000494333 RHBDL3P58872 404 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 PPATQ06203 517 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 CRHR2Q13324 411 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 RPAP2Q8IXW5 612 aaPredicted RBP9.86□□□□□ -0.83
RIF1-211ENST00000494333 CEP120Q8N960 986 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 ARAP2Q8WZ64 1704 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 ZNF512BQ96KM6 892 aaPredicted RBP9.86□□□□□ -0.83
RIF1-211ENST00000494333 SPACA7Q96KW9 195 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 SMG9Q9H0W8 520 aaKnown RBP9.86□□□□□ -0.83
RIF1-211ENST00000494333 DDX4Q9NQI0 724 aaKnown RBP9.86□□□□□ -0.83
RIF1-211ENST00000494333 FRRS1LQ9P0K9 344 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 ZNF112Q9UJU3 913 aa9.86□□□□□ -0.83
RIF1-211ENST00000494333 DBNLQ9UJU6 430 aaKnown RBP9.86□□□□□ -0.83
RIF1-211ENST00000494333 EIF1AYO14602 144 aaKnown RBP9.85□□□□□ -0.83
RIF1-211ENST00000494333 CPNE3O75131 537 aaKnown RBP9.85□□□□□ -0.83
RIF1-211ENST00000494333 RGS9O75916 674 aaPredicted RBP9.85□□□□□ -0.83
RIF1-211ENST00000494333 CETPP11597 493 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 PPIL2Q13356 520 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 SNAPC2Q13487 334 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 HSP90AB4PQ58FF6 505 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 TMCO4Q5TGY1 634 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 NAA16Q6N069 864 aaPredicted RBP9.85□□□□□ -0.83
RIF1-211ENST00000494333 DNAJC14Q6Y2X3 702 aaPredicted RBP9.85□□□□□ -0.83
RIF1-211ENST00000494333 ERC1Q8IUD2 1116 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 FAM43AQ8N2R8 423 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 PLD4Q96BZ4 506 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 BCL11AQ9H165 835 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 RBSNQ9H1K0 784 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 CHMP4BQ9H444 224 aaKnown RBP9.85□□□□□ -0.83
RIF1-211ENST00000494333 JPH1Q9HDC5 661 aaPredicted RBP9.85□□□□□ -0.83
RIF1-211ENST00000494333 ZBTB40Q9NUA8 1239 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 AKAP11Q9UKA4 1901 aa9.85□□□□□ -0.83
RIF1-211ENST00000494333 ANKRD33BA6NCL7 494 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 HMMRO75330 724 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 BAG3O95817 575 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 MAP4K4O95819 1239 aaPredicted RBP9.84□□□□□ -0.83
RIF1-211ENST00000494333 ACPPP15309 386 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 ATP11AP98196 1134 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 SP3Q02447 781 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 TAF1CQ15572 869 aaPredicted RBP9.84□□□□□ -0.83
RIF1-211ENST00000494333 C20orf194Q5TEA3 1177 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 LINC00114Q6XXX2 140 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms