RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 KDM4AO75164 1064 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 ICAM1P05362 532 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 FDX1P10109 184 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 SLC35G1Q2M3R5 365 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 TKFCQ3LXA3 575 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 ASTLQ6HA08 431 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-234ENST00000493923 FAM109BQ6ICB4 259 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-234ENST00000493923 CXCL17Q6UXB2 119 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 MFSD6Q6ZSS7 791 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 C16orf59Q7L2K0 433 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 ANKRD33Q7Z3H0 272 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 MORC4Q8TE76 937 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 TTYH1Q9H313 450 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-234ENST00000493923 STARD7Q9NQZ5 370 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 TBX21Q9UL17 535 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 ZKSCAN5Q9Y2L8 839 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 CHD7Q9P2D1 2997 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 UMODL1Q5DID0 1318 aa9.49□□□□□ -0.89
HDAC6-234ENST00000493923 MYH6P13533 1939 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 DYNC1LI2O43237 492 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-234ENST00000493923 BRD2P25440 801 aaKnown RBP9.48□□□□□ -0.89
HDAC6-234ENST00000493923 GTF2F1P35269 517 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC6-234ENST00000493923 PSMC6P62333 389 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 NKX3-2P78367 333 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 TNFAIP2Q03169 654 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 PTH1RQ03431 593 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 GABPB1Q06547 395 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-234ENST00000493923 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-234ENST00000493923 GNASQ5JWF2 1037 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 GPR153Q6NV75 609 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 CYB5R4Q7L1T6 521 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 SKAP1Q86WV1 359 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 MYRIPQ8NFW9 859 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 COPS5Q92905 334 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 SNX21Q969T3 373 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 VWCEQ96DN2 955 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 SENP2Q9HC62 589 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 TMEM39AQ9NV64 488 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 PRKAG2Q9UGJ0 569 aa9.48□□□□□ -0.89
HDAC6-234ENST00000493923 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 GRXCR1A8MXD5 290 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 ARVCFO00192 962 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 RAG1P15918 1043 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 CALML3P27482 149 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 ALDH5A1P51649 535 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-234ENST00000493923 ZNF445P59923 1031 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 USH1GQ495M9 461 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 DNTTIP2Q5QJE6 756 aaKnown RBP9.47□□□□□ -0.89
HDAC6-234ENST00000493923 TTC22Q5TAA0 569 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 NOL8Q76FK4 1167 aaKnown RBP9.47□□□□□ -0.89
HDAC6-234ENST00000493923 TLK2Q86UE8 772 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 TICAM2Q86XR7 235 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 FAM126BQ8IXS8 530 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 ENAHQ8N8S7 591 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-234ENST00000493923 SLC43A3Q8NBI5 491 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 PDLIM2Q96JY6 352 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 TOX2Q96NM4 488 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 PPP1R12CQ9BZL4 782 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 DIAPH3Q9NSV4 1193 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 ZSWIM5Q9P217 1185 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 COL20A1Q9P218 1284 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 SCN5AQ14524 2016 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 TET1Q8NFU7 2136 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 VCANP13611 3396 aa9.47□□□□□ -0.89
HDAC6-234ENST00000493923 SCN10AQ9Y5Y9 1956 aa9.46□□□□□ -0.89
HDAC6-234ENST00000493923 PTPDC1A2A3K4 754 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 ASB14A6NK59 587 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 ZNF213O14771 459 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-234ENST00000493923 ARIH2O95376 493 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 CD4P01730 458 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 ACRP10323 421 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 CYP2C18P33260 490 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 RPS6P62753 249 aaKnown RBP9.46□□□□□ -0.9
HDAC6-234ENST00000493923 FSCN1Q16658 493 aaKnown RBP9.46□□□□□ -0.9
HDAC6-234ENST00000493923 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 CLEC17AQ6ZS10 378 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 RASEFQ8IZ41 740 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 STAG2Q8N3U4 1231 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 PDCL2Q8N4E4 241 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 PNMA1Q8ND90 353 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 SLC17A8Q8NDX2 589 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 NUP133Q8WUM0 1156 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 ANKS1AQ92625 1134 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 VTI1AQ96AJ9 217 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 TTC14Q96N46 770 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.46□□□□□ -0.93e-11■□□□□ 10.3
HDAC6-234ENST00000493923 DSCC1Q9BVC3 393 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 TRPV6Q9H1D0 765 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 STXBP5LQ9Y2K9 1186 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 KIF3AQ9Y496 699 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 ELP1O95163 1332 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 GBF1Q92538 1859 aa9.46□□□□□ -0.9
HDAC6-234ENST00000493923 SPTBN5Q9NRC6 3674 aaKnown RBP9.45□□□□□ -0.9
HDAC6-234ENST00000493923 RBM47A0AV96 593 aaKnown RBP9.45□□□□□ -0.9
HDAC6-234ENST00000493923 DCDC2CA8MYV0 355 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 OPLAHO14841 1288 aa9.45□□□□□ -0.9
HDAC6-234ENST00000493923 PPP1R11O60927 126 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-234ENST00000493923 TIMP1P01033 207 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms