RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 NAT2P11245 290 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 GAB4Q2WGN9 574 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 NOL9Q5SY16 702 aaKnown RBP6.91□□□□□ -1.3
CCNB3-208ENST00000493507 SOGA3Q5TF21 947 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 NBPF6Q5VWK0 638 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 DCAF15Q66K64 600 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 HEATR6Q6AI08 1181 aaKnown RBP6.91□□□□□ -1.3
CCNB3-208ENST00000493507 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 TMC3Q7Z5M5 1100 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 NBPF11Q86T75 865 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 ZNF655Q8N720 491 aaPredicted RBP6.91□□□□□ -1.3
CCNB3-208ENST00000493507 KLHL6Q8WZ60 621 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 NBPF4Q96M43 638 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 DRC1Q96MC2 740 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 HAUS7Q99871 368 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 GBP3Q9H0R5 595 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 PAK6Q9NQU5 681 aaPredicted RBP6.91□□□□□ -1.3
CCNB3-208ENST00000493507 CHST7Q9NS84 486 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 FAM86C1Q9NVL1 165 aa6.91□□□□□ -1.3
CCNB3-208ENST00000493507 A0A087WZG4 1122 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 SHISA3A0PJX4 238 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 SHOXO15266 292 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 ADAMTS4O75173 837 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 CD247P20963 164 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 RBL2Q08999 1139 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 SNW1Q13573 536 aaKnown RBP6.9□□□□□ -1.3
CCNB3-208ENST00000493507 ZNF574Q6ZN55 896 aaPredicted RBP6.9□□□□□ -1.3
CCNB3-208ENST00000493507 KRT28Q7Z3Y7 464 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 CREG2Q8IUH2 290 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 UNC5CLQ8IV45 518 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 FAM178BQ8IXR5 827 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 Q8N3U1 123 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 HNRNPLLQ8WVV9 542 aaKnown RBP6.9□□□□□ -1.3
CCNB3-208ENST00000493507 DHX38Q92620 1227 aaKnown RBP6.9□□□□□ -1.3
CCNB3-208ENST00000493507 HDAC8Q9BY41 377 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 TRIM55Q9BYV6 548 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 GP6Q9HCN6 339 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 DUSP13Q9UII6 198 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 ZNF451Q9Y4E5 1061 aa6.9□□□□□ -1.3
CCNB3-208ENST00000493507 LTN1O94822 1766 aa6.9□□□□□ -1.31
CCNB3-208ENST00000493507 ANKRD34BA5PLL1 514 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 U2SURPO15042 1029 aaKnown RBP6.89□□□□□ -1.31
CCNB3-208ENST00000493507 DDAH1O94760 285 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 PRAMEF1O95521 474 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 ITGA4P13612 1032 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 FUT4P22083 530 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 CD96P40200 585 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 ZNF143P52747 638 aaPredicted RBP6.89□□□□□ -1.31
CCNB3-208ENST00000493507 ZP2Q05996 745 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 RAB33AQ14088 237 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 PLCL1Q15111 1095 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 C6orf15Q6UXA7 325 aaPredicted RBP6.89□□□□□ -1.31
CCNB3-208ENST00000493507 NFXL1Q6ZNB6 911 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 GFOD1Q9NXC2 390 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 WHRNQ9P202 907 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 FHOD1Q9Y613 1164 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 SPATA31A3Q5VYP0 1347 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 NPHP3Q7Z494 1330 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 SLIT3O75094 1523 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 SLIT2O94813 1529 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 THSD7AQ9UPZ6 1657 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 RGPD2P0DJD1 1756 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 COL14A1Q05707 1796 aaKnown RBP6.89□□□□□ -1.31
CCNB3-208ENST00000493507 KIF20BQ96Q89 1820 aa6.89□□□□□ -1.31
CCNB3-208ENST00000493507 SSH2Q76I76 1423 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 POLR3AO14802 1390 aaPredicted RBP6.88□□□□□ -1.31
CCNB3-208ENST00000493507 FAM83GA6ND36 823 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 WASH4PA8MWX3 477 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 CBFA2T2O43439 604 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 PPM1BO75688 479 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 ESR1P03372 595 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 EPHX1P07099 455 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 GP2P55259 537 aaKnown RBP6.88□□□□□ -1.31
CCNB3-208ENST00000493507 ZNF445P59923 1031 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 SLC23A3Q6PIS1 610 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 ADAT2Q7Z6V5 191 aaKnown RBP6.88□□□□□ -1.31
CCNB3-208ENST00000493507 WFDC3Q8IUB2 231 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 PI4K2BQ8TCG2 481 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 TCTN2Q96GX1 697 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 APBA2Q99767 749 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 DSCC1Q9BVC3 393 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 KLHL25Q9H0H3 589 aa6.88□□□□□ -1.31
CCNB3-208ENST00000493507 CARS2Q9HA77 564 aaKnown RBP6.88□□□□□ -1.31
CCNB3-208ENST00000493507 DIS3Q9Y2L1 958 aaKnown RBP6.88□□□□□ -1.31
CCNB3-208ENST00000493507 NFAT5O94916 1531 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 ROCK2O75116 1388 aaKnown RBP6.87□□□□□ -1.31
CCNB3-208ENST00000493507 SSU72P8A0A1W2PR75 194 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 PCBP3P57721 371 aaKnown RBP6.87□□□□□ -1.31
CCNB3-208ENST00000493507 EGR3Q06889 387 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 DDR2Q16832 855 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 RNF111Q6ZNA4 994 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 LINC00116Q8NCU8 138 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 PMFBP1Q8TBY8 1022 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 SYTL4Q96C24 671 aaPredicted RBP6.87□□□□□ -1.31
CCNB3-208ENST00000493507 CCDC120Q96HB5 630 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 PCGF6Q9BYE7 350 aa6.87□□□□□ -1.31
CCNB3-208ENST00000493507 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
CCNB3-208ENST00000493507 PPIP5K1Q6PFW1 1433 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 GSNP06396 782 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms