RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 RPS6P62753 249 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 TFF2Q03403 129 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 TAP1Q03518 808 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 SESTD1Q86VW0 696 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 HLA-CQ95604 372 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 HCN4Q9Y3Q4 1203 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 REV3LO60673 3130 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 FOXP2O15409 715 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 TXNP10599 105 aaKnown RBP12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 MX1P20591 662 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 CALML3P27482 149 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 SLC16A2P36021 539 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 KCNQ1P51787 676 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 SLC30A10Q6XR72 485 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 CLEC4DQ8WXI8 215 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 ARNTL2Q8WYA1 636 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 CHMP4CQ96CF2 233 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 TMEM47Q9BQJ4 181 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 HELLSQ9NRZ9 838 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 MTMR7Q9Y216 660 aa12.93□□□□□ -0.34
SNRNP200-207ENST00000493271 TLL1O43897 1013 aa12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 PDHBP11177 359 aa12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 RBL2Q08999 1139 aa12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 C20orf194Q5TEA3 1177 aa12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 TTBK2Q6IQ55 1244 aa12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 NECAB3Q96P71 396 aaPredicted RBP12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 TOMM22Q9NS69 142 aa12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
SNRNP200-207ENST00000493271 RFXAPO00287 272 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 SNHG28P0DPA3 235 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 SELPP16109 830 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 HOXD11P31277 338 aaPredicted RBP12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 GRB10Q13322 594 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 PTGISQ16647 500 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 CNKSR3Q6P9H4 555 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 RASGRP2Q7LDG7 609 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 KATNAL1Q9BW62 490 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 CERS4Q9HA82 394 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 GPCPD1Q9NPB8 672 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 RAPGEFL1Q9UHV5 662 aa12.91□□□□□ -0.34
SNRNP200-207ENST00000493271 FRMPD2Q68DX3 1309 aaPredicted RBP12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 GH1P01241 217 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 CXCL10P02778 98 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 WDR5P61964 334 aaKnown RBP12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 CCDC178Q5BJE1 867 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 TMEM31Q5JXX7 168 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 CCDC62Q6P9F0 684 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 LRRC8DQ7L1W4 858 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 NSUN6Q8TEA1 469 aaKnown RBP12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 RAD9AQ99638 391 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 LRFN3Q9BTN0 628 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 ZBED2Q9BTP6 218 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 RNF41Q9H4P4 317 aaPredicted RBP12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 INCENPQ9NQS7 918 aa12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
SNRNP200-207ENST00000493271 SCN5AQ14524 2016 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 ABCB11O95342 1321 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 EPOPA6NHQ4 379 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 LPXNO60711 386 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 GPR37L1O60883 481 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 FGAP02671 866 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 MMP3P08254 477 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 DGKDQ16760 1214 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 MCMDC2Q4G0Z9 681 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 RRP12Q5JTH9 1297 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 MFSD6Q6ZSS7 791 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 DGKHQ86XP1 1220 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 GTF2IRD1Q9UHL9 959 aa12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 TCF20Q9UGU0 1960 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-207ENST00000493271 GJB5O95377 273 aa12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 MFAP1P55081 439 aaKnown RBP12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 IKBKEQ14164 716 aa12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 STXBP2Q15833 593 aa12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 C7orf31Q8N865 590 aa12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 ESR2Q92731 530 aa12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 COPS5Q92905 334 aa12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 TGS1Q96RS0 853 aaKnown RBP12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 EMSYQ7Z589 1322 aa12.88□□□□□ -0.35
SNRNP200-207ENST00000493271 EIF3JO75822 258 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 ARIH2O95376 493 aa12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 CKBP12277 381 aa12.87□□□□□ -0.35
SNRNP200-207ENST00000493271 ERVK-21P61565 698 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms