RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 RMDN3Q96TC7 470 aa20.94■□□□□ 0.94
PTPRU-207ENST00000492954 MYL10Q9BUA6 226 aa20.94■□□□□ 0.94
PTPRU-207ENST00000492954 ARIH2O95376 493 aa20.93■□□□□ 0.94
PTPRU-207ENST00000492954 MCM5P33992 734 aa20.93■□□□□ 0.94
PTPRU-207ENST00000492954 HSD17B4P51659 736 aa20.93■□□□□ 0.94
PTPRU-207ENST00000492954 ITGA7Q13683 1181 aa20.93■□□□□ 0.94
PTPRU-207ENST00000492954 ZNF654Q8IZM8 581 aa20.93■□□□□ 0.94
PTPRU-207ENST00000492954 SLC43A3Q8NBI5 491 aa20.93■□□□□ 0.94
PTPRU-207ENST00000492954 PCDHA1Q9Y5I3 950 aa20.93■□□□□ 0.94
PTPRU-207ENST00000492954 GRIN2DO15399 1336 aa20.93■□□□□ 0.94
PTPRU-207ENST00000492954 NKRFO15226 690 aaKnown RBP eCLIP20.92■□□□□ 0.94
PTPRU-207ENST00000492954 TIMP1P01033 207 aa20.92■□□□□ 0.94
PTPRU-207ENST00000492954 EIF2AK2P19525 551 aaKnown RBP20.92■□□□□ 0.94
PTPRU-207ENST00000492954 EPHB4P54760 987 aa20.92■□□□□ 0.94
PTPRU-207ENST00000492954 ARHGEF16Q5VV41 709 aa20.92■□□□□ 0.94
PTPRU-207ENST00000492954 GPR153Q6NV75 609 aa20.92■□□□□ 0.94
PTPRU-207ENST00000492954 PIBF1Q8WXW3 757 aa20.92■□□□□ 0.94
PTPRU-207ENST00000492954 CCDC136Q96JN2 1154 aa20.92■□□□□ 0.94
PTPRU-207ENST00000492954 IWS1Q96ST2 819 aa20.92■□□□□ 0.94
PTPRU-207ENST00000492954 SH2B2O14492 632 aaPredicted RBP20.91■□□□□ 0.94
PTPRU-207ENST00000492954 TLR3O15455 904 aaKnown RBP20.91■□□□□ 0.94
PTPRU-207ENST00000492954 DDAH1O94760 285 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 CD4P01730 458 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 MYL3P08590 195 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 TXNP10599 105 aaKnown RBP20.91■□□□□ 0.94
PTPRU-207ENST00000492954 CPT1AP50416 773 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 GHRHRQ02643 423 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 TTLL4Q14679 1199 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 SEPT14Q6ZU15 432 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 Q7L0L9 218 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 TMEM87BQ96K49 555 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 MTA3Q9BTC8 594 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 PXMP2Q9NR77 195 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 POLR3EQ9NVU0 708 aa20.91■□□□□ 0.94
PTPRU-207ENST00000492954 MYH6P13533 1939 aa20.9■□□□□ 0.94
PTPRU-207ENST00000492954 PNMA6FA0A0J9YX94 578 aa20.9■□□□□ 0.94
PTPRU-207ENST00000492954 HOXA13P31271 388 aaPredicted RBP20.9■□□□□ 0.94
PTPRU-207ENST00000492954 PURAQ00577 322 aaKnown RBP20.9■□□□□ 0.94
PTPRU-207ENST00000492954 FPGSQ05932 587 aa20.9■□□□□ 0.94
PTPRU-207ENST00000492954 STXBP2Q15833 593 aa20.9■□□□□ 0.94
PTPRU-207ENST00000492954 CCDC62Q6P9F0 684 aa20.9■□□□□ 0.94
PTPRU-207ENST00000492954 NFXL1Q6ZNB6 911 aa20.9■□□□□ 0.94
PTPRU-207ENST00000492954 DEFB123Q8N688 67 aa20.9■□□□□ 0.94
PTPRU-207ENST00000492954 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
PTPRU-207ENST00000492954 CDC45O75419 566 aa20.89■□□□□ 0.93
PTPRU-207ENST00000492954 NR3C2P08235 984 aa20.89■□□□□ 0.93
PTPRU-207ENST00000492954 LY6KQ17RY6 165 aa20.89■□□□□ 0.93
PTPRU-207ENST00000492954 CTCFLQ8NI51 663 aaPredicted RBP20.89■□□□□ 0.93
PTPRU-207ENST00000492954 MAP3K14Q99558 947 aa20.89■□□□□ 0.93
PTPRU-207ENST00000492954 LRRC2Q9BYS8 371 aa20.89■□□□□ 0.93
PTPRU-207ENST00000492954 PPP1R12CQ9BZL4 782 aa20.89■□□□□ 0.93
PTPRU-207ENST00000492954 TRPV6Q9H1D0 765 aa20.89■□□□□ 0.93
PTPRU-207ENST00000492954 CCDC69A6NI79 296 aa20.88■□□□□ 0.93
PTPRU-207ENST00000492954 A6NJR5 290 aa20.88■□□□□ 0.93
PTPRU-207ENST00000492954 B4GALT4O60513 344 aa20.88■□□□□ 0.93
PTPRU-207ENST00000492954 RXRAP19793 462 aa20.88■□□□□ 0.93
PTPRU-207ENST00000492954 TRAF1Q13077 416 aa20.88■□□□□ 0.93
PTPRU-207ENST00000492954 BRDTQ58F21 947 aaPredicted RBP20.88■□□□□ 0.93
PTPRU-207ENST00000492954 MFSD5Q6N075 450 aa20.88■□□□□ 0.93
PTPRU-207ENST00000492954 TMTC2Q8N394 836 aa20.88■□□□□ 0.93
PTPRU-207ENST00000492954 PDCD2LQ9BRP1 358 aa20.88■□□□□ 0.93
PTPRU-207ENST00000492954 MAP3K20Q9NYL2 800 aaKnown RBP20.88■□□□□ 0.93
PTPRU-207ENST00000492954 GCOM1H8Y6P7 765 aaPredicted RBP20.87■□□□□ 0.93
PTPRU-207ENST00000492954 EIF3JO75822 258 aaKnown RBP20.87■□□□□ 0.93
PTPRU-207ENST00000492954 PLEKHA8P1O95397 391 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 POLR2MP0CAP2 368 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 KIF5BP33176 963 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 CYP2C18P33260 490 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 LIFRP42702 1097 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 RNF20Q5VTR2 975 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 RAB11FIP4Q86YS3 637 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 RNPC3Q96LT9 517 aaKnown RBP20.87■□□□□ 0.93
PTPRU-207ENST00000492954 MTG1Q9BT17 334 aaPredicted RBP20.87■□□□□ 0.93
PTPRU-207ENST00000492954 SPZ1Q9BXG8 430 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 SEZ6LQ9BYH1 1024 aa20.87■□□□□ 0.93
PTPRU-207ENST00000492954 GH1P01241 217 aa20.86■□□□□ 0.93
PTPRU-207ENST00000492954 MYCLP12524 364 aaPredicted RBP20.86■□□□□ 0.93
PTPRU-207ENST00000492954 ARHGAP1Q07960 439 aa20.86■□□□□ 0.93
PTPRU-207ENST00000492954 FCHSD1Q86WN1 690 aa20.86■□□□□ 0.93
PTPRU-207ENST00000492954 SAMD3Q8N6K7 520 aa20.86■□□□□ 0.93
PTPRU-207ENST00000492954 IL31RAQ8NI17 732 aa20.86■□□□□ 0.93
PTPRU-207ENST00000492954 PPP1R13LQ8WUF5 828 aa20.86■□□□□ 0.93
PTPRU-207ENST00000492954 AFG1LQ8WV93 481 aa20.86■□□□□ 0.93
PTPRU-207ENST00000492954 RRP36Q96EU6 259 aaKnown RBP20.86■□□□□ 0.93
PTPRU-207ENST00000492954 ALDH8A1Q9H2A2 487 aaPredicted RBP20.86■□□□□ 0.93
PTPRU-207ENST00000492954 HIPK3Q9H422 1215 aa20.86■□□□□ 0.93
PTPRU-207ENST00000492954 UMODL1Q5DID0 1318 aa20.85■□□□□ 0.93
PTPRU-207ENST00000492954 CSF2RAP15509 400 aa20.85■□□□□ 0.93
PTPRU-207ENST00000492954 PPIGQ13427 754 aaKnown RBP eCLIP20.85■□□□□ 0.932e-7■■□□□ 11.8
PTPRU-207ENST00000492954 RASEFQ8IZ41 740 aa20.85■□□□□ 0.93
PTPRU-207ENST00000492954 CMTR1Q8N1G2 835 aaKnown RBP20.85■□□□□ 0.93
PTPRU-207ENST00000492954 SRBD1Q8N5C6 995 aaKnown RBP20.85■□□□□ 0.93
PTPRU-207ENST00000492954 LZTS2Q9BRK4 669 aa20.85■□□□□ 0.93
PTPRU-207ENST00000492954 SLC12A7Q9Y666 1083 aa20.85■□□□□ 0.93
PTPRU-207ENST00000492954 COL6A3P12111 3177 aa20.85■□□□□ 0.93
PTPRU-207ENST00000492954 KPNA6O60684 536 aa20.84■□□□□ 0.93
PTPRU-207ENST00000492954 SMARCA1P28370 1054 aa20.84■□□□□ 0.93
PTPRU-207ENST00000492954 GNAQP50148 359 aa20.84■□□□□ 0.93
PTPRU-207ENST00000492954 PGM5Q15124 567 aa20.84■□□□□ 0.93
PTPRU-207ENST00000492954 NBPF20Q3BBV1 942 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms