RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 ALKBH2Q6NS38 261 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 TMEM214Q6NUQ4 689 aaKnown RBP5.37□□□□□ -1.55
UBR4-215ENST00000492606 ZNF790Q6PG37 636 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 ARRDC4Q8NCT1 418 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 RNF217Q8TC41 542 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 USP6NLQ92738 828 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 ALKBH8Q96BT7 664 aaKnown RBP5.37□□□□□ -1.55
UBR4-215ENST00000492606 VWCEQ96DN2 955 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 TSEN34Q9BSV6 310 aaKnown RBP5.37□□□□□ -1.55
UBR4-215ENST00000492606 TMEM39BQ9GZU3 492 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 BRPF3Q9ULD4 1205 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 ZNF232Q9UNY5 417 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 MYO3BQ8WXR4 1341 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 A0A1B0GUL6 1792 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 DOPEY2Q9Y3R5 2298 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 SPG11Q96JI7 2443 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 SLC30A4O14863 429 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 CAPN5O15484 640 aaPredicted RBP5.36□□□□□ -1.55
UBR4-215ENST00000492606 ATP2A2P16615 1042 aaKnown RBP5.36□□□□□ -1.55
UBR4-215ENST00000492606 POU3F2P20265 443 aaPredicted RBP5.36□□□□□ -1.55
UBR4-215ENST00000492606 MZF1P28698 734 aaPredicted RBP5.36□□□□□ -1.55
UBR4-215ENST00000492606 CNGA1P29973 690 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 INPP5BP32019 993 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 ZAP70P43403 619 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 PLA2G4AP47712 749 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 MMP14P50281 582 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 LMNB2Q03252 620 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 DLX2Q07687 328 aaPredicted RBP5.36□□□□□ -1.55
UBR4-215ENST00000492606 EHHADHQ08426 723 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 CBX2Q14781 532 aaPredicted RBP5.36□□□□□ -1.55
UBR4-215ENST00000492606 STRIP1Q5VSL9 837 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 TTLL7Q6ZT98 887 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 EP400NLQ6ZTU2 488 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 TRIM46Q7Z4K8 759 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 TMEM199Q8N511 208 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 SMCR8Q8TEV9 937 aaPredicted RBP5.36□□□□□ -1.55
UBR4-215ENST00000492606 EDEM1Q92611 657 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 PABPC5Q96DU9 382 aaKnown RBP5.36□□□□□ -1.55
UBR4-215ENST00000492606 SUGCTQ9HAC7 445 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 FLRT1Q9NZU1 646 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 LOC285556D6RIA3 1793 aa5.36□□□□□ -1.55
UBR4-215ENST00000492606 PTPRQQ9UMZ3 2332 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 PTPRFP10586 1907 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 SALL1Q9NSC2 1324 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 TMEM8BA6NDV4 472 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 ENO4A6NNW6 628 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 NDUFB5O43674 189 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 PI15O43692 258 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 PEX10O60683 326 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 IGSF3O75054 1194 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 CYP2C18P33260 490 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 PHKA2P46019 1235 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 POU4F2Q12837 409 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 COL28A1Q2UY09 1125 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 CFAP100Q494V2 611 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 ANKRD33Q7Z3H0 272 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 TREML1Q86YW5 311 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 ZCCHC14Q8WYQ9 949 aaKnown RBP5.35□□□□□ -1.55
UBR4-215ENST00000492606 GATA6Q92908 595 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 SUSD3Q96L08 255 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 DMRTB1Q96MA1 342 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 FMNL2Q96PY5 1086 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 MTIF3Q9H2K0 278 aaKnown RBP5.35□□□□□ -1.55
UBR4-215ENST00000492606 ZDHHC3Q9NYG2 299 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 GGA1Q9UJY5 639 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 CHMP3Q9Y3E7 222 aa5.35□□□□□ -1.55
UBR4-215ENST00000492606 TLN1Q9Y490 2541 aaKnown RBP5.34□□□□□ -1.55
UBR4-215ENST00000492606 PCNX1Q96RV3 2341 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 MAP3K15Q6ZN16 1313 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 A6NHS1 94 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 ERVV-1B6SEH8 477 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 PYCARD-AS1I3L0S3 204 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 J3QKU1 62 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 MSCO60682 206 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 MICAL2O94851 1124 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 HOXD8P13378 290 aaPredicted RBP5.34□□□□□ -1.55
UBR4-215ENST00000492606 SPINK2P20155 84 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 PLCB3Q01970 1234 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 WDR44Q5JSH3 913 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 MRPL14Q6P1L8 145 aaKnown RBP5.34□□□□□ -1.55
UBR4-215ENST00000492606 PRICKLE2Q7Z3G6 844 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 ZNF605Q86T29 641 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 CCDC105Q8IYK2 499 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 CERS5Q8N5B7 392 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 NGEFQ8N5V2 710 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 WHAMMQ8TF30 809 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 HSH2DQ96JZ2 352 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 TOX2Q96NM4 488 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 NIF3L1Q9GZT8 377 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 CLMPQ9H6B4 373 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 PARD6AQ9NPB6 346 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 MTUS1Q9ULD2 1270 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 PHF24Q9UPV7 400 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 MYO10Q9HD67 2058 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 KIF20BQ96Q89 1820 aa5.34□□□□□ -1.55
UBR4-215ENST00000492606 SIPA1L3O60292 1781 aaPredicted RBP5.34□□□□□ -1.56
UBR4-215ENST00000492606 SHROOM3Q8TF72 1996 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 PTPRSQ13332 1948 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 UTYO14607 1347 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 A0A0G2JLL6 359 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms