RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RMDN3Q96TC7 470 aa20.94■□□□□ 0.94
HMGN1-219ENST00000491183 GPHNQ9NQX3 736 aaPredicted RBP20.94■□□□□ 0.94
HMGN1-219ENST00000491183 NKRFO15226 690 aaKnown RBP eCLIP20.93■□□□□ 0.94
HMGN1-219ENST00000491183 CFBP00751 764 aa20.93■□□□□ 0.94
HMGN1-219ENST00000491183 TXNP10599 105 aaKnown RBP20.93■□□□□ 0.94
HMGN1-219ENST00000491183 HSD17B4P51659 736 aa20.93■□□□□ 0.94
HMGN1-219ENST00000491183 PURAQ00577 322 aaKnown RBP20.93■□□□□ 0.94
HMGN1-219ENST00000491183 GHRHRQ02643 423 aa20.93■□□□□ 0.94
HMGN1-219ENST00000491183 SART3Q15020 963 aaKnown RBP20.93■□□□□ 0.94
HMGN1-219ENST00000491183 PPP2R5BQ15173 497 aa20.93■□□□□ 0.94
HMGN1-219ENST00000491183 NECTIN1Q15223 517 aa20.93■□□□□ 0.94
HMGN1-219ENST00000491183 CCDC62Q6P9F0 684 aa20.93■□□□□ 0.94
HMGN1-219ENST00000491183 PIGSQ96S52 555 aa20.93■□□□□ 0.94
HMGN1-219ENST00000491183 IWS1Q96ST2 819 aa20.93■□□□□ 0.94
HMGN1-219ENST00000491183 KIAA1217Q5T5P2 1943 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 SLC27A2O14975 620 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 CPT1AP50416 773 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 BMP2KLQ5H9B9 411 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 FAM109BQ6ICB4 259 aaPredicted RBP20.92■□□□□ 0.94
HMGN1-219ENST00000491183 C16orf59Q7L2K0 433 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 HOMER1Q86YM7 354 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 PPP1R12CQ9BZL4 782 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 TRPV6Q9H1D0 765 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 LY9Q9HBG7 655 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 POLR3EQ9NVU0 708 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 PCDHA1Q9Y5I3 950 aa20.92■□□□□ 0.94
HMGN1-219ENST00000491183 A6NJR5 290 aa20.91■□□□□ 0.94
HMGN1-219ENST00000491183 MYL3P08590 195 aa20.91■□□□□ 0.94
HMGN1-219ENST00000491183 TTLL4Q14679 1199 aa20.91■□□□□ 0.94
HMGN1-219ENST00000491183 ARHGEF16Q5VV41 709 aa20.91■□□□□ 0.94
HMGN1-219ENST00000491183 SEPT14Q6ZU15 432 aa20.91■□□□□ 0.94
HMGN1-219ENST00000491183 CATIPQ7Z7H3 387 aa20.91■□□□□ 0.94
HMGN1-219ENST00000491183 SEZ6LQ9BYH1 1024 aa20.91■□□□□ 0.94
HMGN1-219ENST00000491183 PXMP2Q9NR77 195 aa20.91■□□□□ 0.94
HMGN1-219ENST00000491183 PRC1O43663 620 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 B4GALT4O60513 344 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 NR3C2P08235 984 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 CSF2RAP15509 400 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 EIF2AK2P19525 551 aaKnown RBP20.9■□□□□ 0.94
HMGN1-219ENST00000491183 CYP2C18P33260 490 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 STXBP2Q15833 593 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 LY6KQ17RY6 165 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 CREB3L3Q68CJ9 461 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 RNPC3Q96LT9 517 aaKnown RBP20.9■□□□□ 0.94
HMGN1-219ENST00000491183 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.9■□□□□ 0.944e-7■■■□□ 17.3
HMGN1-219ENST00000491183 MYL10Q9BUA6 226 aa20.9■□□□□ 0.94
HMGN1-219ENST00000491183 LAMA2P24043 3122 aaKnown RBP20.89■□□□□ 0.94
HMGN1-219ENST00000491183 UMODL1Q5DID0 1318 aa20.89■□□□□ 0.93
HMGN1-219ENST00000491183 PNMA6FA0A0J9YX94 578 aa20.89■□□□□ 0.93
HMGN1-219ENST00000491183 SMAD3P84022 425 aaKnown RBP20.89■□□□□ 0.93
HMGN1-219ENST00000491183 ZNF654Q8IZM8 581 aa20.89■□□□□ 0.93
HMGN1-219ENST00000491183 MTG1Q9BT17 334 aaPredicted RBP20.89■□□□□ 0.93
HMGN1-219ENST00000491183 MTA3Q9BTC8 594 aa20.89■□□□□ 0.93
HMGN1-219ENST00000491183 ALDH8A1Q9H2A2 487 aaPredicted RBP20.89■□□□□ 0.93
HMGN1-219ENST00000491183 ANO2Q9NQ90 1003 aa20.89■□□□□ 0.93
HMGN1-219ENST00000491183 MAP3K20Q9NYL2 800 aaKnown RBP20.89■□□□□ 0.93
HMGN1-219ENST00000491183 SCN10AQ9Y5Y9 1956 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 SH2B2O14492 632 aaPredicted RBP20.88■□□□□ 0.93
HMGN1-219ENST00000491183 EIF3JO75822 258 aaKnown RBP20.88■□□□□ 0.93
HMGN1-219ENST00000491183 HOXA13P31271 388 aaPredicted RBP20.88■□□□□ 0.93
HMGN1-219ENST00000491183 MCM5P33992 734 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 ARHGAP1Q07960 439 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 PPIGQ13427 754 aaKnown RBP eCLIP20.88■□□□□ 0.93
HMGN1-219ENST00000491183 TMEM240Q5SV17 173 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 TMEM199Q8N511 208 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 SAMD3Q8N6K7 520 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 PPP1R13LQ8WUF5 828 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 FAM161BQ96MY7 647 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 MAP3K14Q99558 947 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 PDCD2LQ9BRP1 358 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 HIPK3Q9H422 1215 aa20.88■□□□□ 0.93
HMGN1-219ENST00000491183 KPNA6O60684 536 aa20.87■□□□□ 0.93
HMGN1-219ENST00000491183 DDAH1O94760 285 aa20.87■□□□□ 0.93
HMGN1-219ENST00000491183 ACRP10323 421 aa20.87■□□□□ 0.93
HMGN1-219ENST00000491183 NBPF20Q3BBV1 942 aa20.87■□□□□ 0.93
HMGN1-219ENST00000491183 BRDTQ58F21 947 aaPredicted RBP20.87■□□□□ 0.93
HMGN1-219ENST00000491183 CASC1Q6TDU7 716 aa20.87■□□□□ 0.93
HMGN1-219ENST00000491183 AFG1LQ8WV93 481 aa20.87■□□□□ 0.93
HMGN1-219ENST00000491183 TMEM87BQ96K49 555 aa20.87■□□□□ 0.93
HMGN1-219ENST00000491183 NOC4LQ9BVI4 516 aaKnown RBP20.87■□□□□ 0.93
HMGN1-219ENST00000491183 TRMT13Q9NUP7 481 aaKnown RBP20.87■□□□□ 0.93
HMGN1-219ENST00000491183 DDX41Q9UJV9 622 aaKnown RBP20.87■□□□□ 0.93
HMGN1-219ENST00000491183 STXBP5LQ9Y2K9 1186 aa20.87■□□□□ 0.93
HMGN1-219ENST00000491183 GH1P01241 217 aa20.86■□□□□ 0.93
HMGN1-219ENST00000491183 TRAF1Q13077 416 aa20.86■□□□□ 0.93
HMGN1-219ENST00000491183 TMTC2Q8N394 836 aa20.86■□□□□ 0.93
HMGN1-219ENST00000491183 PIBF1Q8WXW3 757 aa20.86■□□□□ 0.93
HMGN1-219ENST00000491183 GUCD1Q96NT3 240 aa20.86■□□□□ 0.93
HMGN1-219ENST00000491183 MYH7BA7E2Y1 1941 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 GCOM1H8Y6P7 765 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-219ENST00000491183 RGS20O76081 388 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 POLR2MP0CAP2 368 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 MYCLP12524 364 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-219ENST00000491183 CCL23P55773 120 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 ZNF697Q5TEC3 545 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 RASIP1Q5U651 963 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 ZNF365Q70YC5 407 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 VSIG10LQ86VR7 867 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 IL31RAQ8NI17 732 aa20.85■□□□□ 0.93
HMGN1-219ENST00000491183 CTCFLQ8NI51 663 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms