RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 CYTH3O43739 400 aa15.79■□□□□ 0.12
TRAIP-211ENST00000491060 ARIH2O95376 493 aa15.79■□□□□ 0.12
TRAIP-211ENST00000491060 MCM5P33992 734 aa15.79■□□□□ 0.12
TRAIP-211ENST00000491060 EPHB4P54760 987 aa15.79■□□□□ 0.12
TRAIP-211ENST00000491060 LY6KQ17RY6 165 aa15.79■□□□□ 0.12
TRAIP-211ENST00000491060 MCF2L2Q86YR7 1114 aa15.79■□□□□ 0.12
TRAIP-211ENST00000491060 CTCFLQ8NI51 663 aaPredicted RBP15.79■□□□□ 0.12
TRAIP-211ENST00000491060 TRPV6Q9H1D0 765 aa15.79■□□□□ 0.12
TRAIP-211ENST00000491060 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
TRAIP-211ENST00000491060 ARVCFO00192 962 aa15.78■□□□□ 0.12
TRAIP-211ENST00000491060 OPLAHO14841 1288 aa15.78■□□□□ 0.12
TRAIP-211ENST00000491060 ZEB2O60315 1214 aa15.78■□□□□ 0.12
TRAIP-211ENST00000491060 CST5P28325 142 aaPredicted RBP15.78■□□□□ 0.12
TRAIP-211ENST00000491060 NT5C2P49902 561 aa15.78■□□□□ 0.12
TRAIP-211ENST00000491060 TROAPQ12815 778 aa15.78■□□□□ 0.12
TRAIP-211ENST00000491060 DUSP28Q4G0W2 176 aa15.78■□□□□ 0.12
TRAIP-211ENST00000491060 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
TRAIP-211ENST00000491060 MORC4Q8TE76 937 aa15.78■□□□□ 0.12
TRAIP-211ENST00000491060 A0A1W2PPC1 479 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 ACRP10323 421 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 CYP2C18P33260 490 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 ITGA7Q13683 1181 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 NECTIN1Q15223 517 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 DNERQ8NFT8 737 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 IL31RAQ8NI17 732 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 NSUN6Q8TEA1 469 aaKnown RBP15.77■□□□□ 0.12
TRAIP-211ENST00000491060 PXMP2Q9NR77 195 aa15.77■□□□□ 0.12
TRAIP-211ENST00000491060 GRIN2DO15399 1336 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 ELP1O95163 1332 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 UMODL1Q5DID0 1318 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 B4DLN1 442 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 TLR3O15455 904 aaKnown RBP15.76■□□□□ 0.11
TRAIP-211ENST00000491060 MRPL12P52815 198 aaKnown RBP15.76■□□□□ 0.11
TRAIP-211ENST00000491060 CCL23P55773 120 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 FPGSQ05932 587 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 TTLL4Q14679 1199 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 STXBP2Q15833 593 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 ADCK5Q3MIX3 580 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 C1orf53Q5VUE5 145 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 SCFD2Q8WU76 684 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 SLC12A7Q9Y666 1083 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 SCN5AQ14524 2016 aa15.76■□□□□ 0.11
TRAIP-211ENST00000491060 PNMA6FA0A0J9YX94 578 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 GCOM1H8Y6P7 765 aaPredicted RBP15.75■□□□□ 0.11
TRAIP-211ENST00000491060 KIAA0355O15063 1070 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 NR3C2P08235 984 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 POLR2MP0CAP2 368 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 EDNRBP24530 442 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 RNF20Q5VTR2 975 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 ANKRD33Q7Z3H0 272 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 FAM126BQ8IXS8 530 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 SRBD1Q8N5C6 995 aaKnown RBP15.75■□□□□ 0.11
TRAIP-211ENST00000491060 DEFB123Q8N688 67 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 GPKOWQ92917 476 aaPredicted RBP eCLIP15.75■□□□□ 0.11
TRAIP-211ENST00000491060 MTMR8Q96EF0 704 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
TRAIP-211ENST00000491060 RNPC3Q96LT9 517 aaKnown RBP15.75■□□□□ 0.11
TRAIP-211ENST00000491060 NEK1Q96PY6 1258 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 RIOX1Q9H6W3 641 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 TRMT13Q9NUP7 481 aaKnown RBP15.75■□□□□ 0.11
TRAIP-211ENST00000491060 SEC63Q9UGP8 760 aaKnown RBP15.75■□□□□ 0.11
TRAIP-211ENST00000491060 MRVI1Q9Y6F6 885 aa15.75■□□□□ 0.11
TRAIP-211ENST00000491060 RBM47A0AV96 593 aaKnown RBP15.74■□□□□ 0.11
TRAIP-211ENST00000491060 B4GALT4O60513 344 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 DDAH1O94760 285 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 CYP2C9P11712 490 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 CSF2RAP15509 400 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 KIF5BP33176 963 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 CPT1AP50416 773 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 CDK7P50613 346 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 FGD1P98174 961 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 RGS22Q8NE09 1264 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 TMEM87BQ96K49 555 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
TRAIP-211ENST00000491060 MROH7Q68CQ1 1323 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 TRIP12Q14669 1992 aaPredicted RBP15.73■□□□□ 0.11
TRAIP-211ENST00000491060 PPFIA3O75145 1194 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 TIMP1P01033 207 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 HSD17B4P51659 736 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 PURAQ00577 322 aaKnown RBP15.73■□□□□ 0.11
TRAIP-211ENST00000491060 PGM5Q15124 567 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 NBPF20Q3BBV1 942 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 USP17L6PQ6QN14 398 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 SYNE3Q6ZMZ3 975 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 SMARCC2Q8TAQ2 1214 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 SCLYQ96I15 445 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 TOX2Q96NM4 488 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 MTG1Q9BT17 334 aaPredicted RBP15.73■□□□□ 0.11
TRAIP-211ENST00000491060 ALG1Q9BT22 464 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 POLR3EQ9NVU0 708 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 TBX21Q9UL17 535 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 BRPF3Q9ULD4 1205 aa15.73■□□□□ 0.11
TRAIP-211ENST00000491060 CABYRO75952 493 aa15.72■□□□□ 0.11
TRAIP-211ENST00000491060 GH1P01241 217 aa15.72■□□□□ 0.11
TRAIP-211ENST00000491060 ZNF286BP0CG31 522 aa15.72■□□□□ 0.11
TRAIP-211ENST00000491060 SP4Q02446 784 aa15.72■□□□□ 0.11
TRAIP-211ENST00000491060 UBE2SQ16763 222 aa15.72■□□□□ 0.11
TRAIP-211ENST00000491060 LRIT3Q3SXY7 679 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms