RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 NUGGCQ68CJ6 796 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 YTHDF3Q7Z739 585 aaKnown RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 ZNF496Q96IT1 587 aaPredicted RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 CCT8L1PA6NM43 557 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 CCDC188H7C350 402 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 CIB2O75838 187 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 H2AFZP0C0S5 128 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 GSCP56915 257 aaPredicted RBP12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 TRAF1Q13077 416 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 SEPT14Q6ZU15 432 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 USP49Q70CQ1 688 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 H2AFVQ71UI9 128 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 UBL4BQ8N7F7 174 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 C3orf20Q8ND61 904 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 ZSWIM5Q9P217 1185 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 ASIC3Q9UHC3 531 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 TNKSO95271 1327 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 SLCO1A2P46721 670 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 TRAPPC10P48553 1259 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 DBN1Q16643 649 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 LRIG3Q6UXM1 1119 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 FUKQ8N0W3 1084 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.36□□□□□ -0.433e-9■■■■■ 80.2
CRNKL1-204ENST00000490910 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 A1CFQ9NQ94 594 aaKnown RBP12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 TCEAL9Q9UHQ7 104 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 FBXL5Q9UKA1 691 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 SNUPNO95149 360 aaKnown RBP12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 IGKV5-2P06315 115 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 ADORA1P30542 326 aa12.36□□□□□ -0.43
CRNKL1-204ENST00000490910 A0A0U1RQJ8 604 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 GRID2IPA4D2P6 1211 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 STXBP3O00186 592 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 ANP32DO95626 131 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 CCND1P24385 295 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 GNA11P29992 359 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 EZH2Q15910 746 aaKnown RBP12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 SPATA24Q86W54 205 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 CCDC65Q8IXS2 484 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 RUNDC3BQ96NL0 473 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 ECT2Q9H8V3 914 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 CREB3O43889 395 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 MYL1P05976 194 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 UBE3CQ15386 1083 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 CCDC62Q6P9F0 684 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 PHLDB2Q86SQ0 1253 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 AENQ8WTP8 325 aaKnown RBP12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 IKQ13123 557 aaPredicted RBP12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 DYNC1I2Q13409 638 aaKnown RBP12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 THEMISQ8N1K5 641 aaPredicted RBP12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 FAM89AQ96GI7 184 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 MS4A14Q96JA4 679 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 ATP6V0A2Q9Y487 856 aa12.35□□□□□ -0.43
CRNKL1-204ENST00000490910 RASGRF2O14827 1237 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 CCNT1O60563 726 aaKnown RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 TXKP42681 527 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 HHATQ5VTY9 493 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 OR2W6PQ8NHA6 318 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 PUS3Q9BZE2 481 aaKnown RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 CRNKL1Q9BZJ0 848 aaKnown RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 ABCC12Q96J65 1359 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 SPDYE3A6NKU9 549 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 H0Y3Z8 333 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 ATP2A1O14983 1001 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 PRPF6O94906 941 aaKnown RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 TNFAIP3P21580 790 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 GRIN1Q05586 938 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 TTLL7Q6ZT98 887 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 U2AF1L4Q8WU68 220 aaKnown RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 XPO6Q96QU8 1125 aaKnown RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 IKBKGQ9Y6K9 419 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 ABCA9Q8IUA7 1624 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 NPHP4O75161 1426 aaPredicted RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 SPOPO43791 374 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 SERPING1P05155 500 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 ADCY2Q08462 1091 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 DPYDQ12882 1025 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 LACRTQ9GZZ8 138 aa12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 IQCGQ9H095 443 aaKnown RBP12.34□□□□□ -0.43
CRNKL1-204ENST00000490910 TBCAO75347 108 aaKnown RBP12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 PSEN1P49768 467 aa12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 GFPT1Q06210 699 aaPredicted RBP12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 NELFCDQ8IXH7 590 aa12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms