RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 SERPINA10Q9UK55 444 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 STK36Q9NRP7 1315 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 MAP2K7O14733 419 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 MEFVO15553 781 aaPredicted RBP14.1□□□□□ -0.15
SHOX2-205ENST00000490689 CARSP49589 748 aaKnown RBP14.1□□□□□ -0.15
SHOX2-205ENST00000490689 LRCH2Q5VUJ6 765 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 CCDC197Q8NCU1 140 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 AGXT2Q9BYV1 514 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 CD248Q9HCU0 757 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 ARHGEF28Q8N1W1 1705 aaKnown RBP14.1□□□□□ -0.15
SHOX2-205ENST00000490689 TULP2O00295 520 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 HIBADHP31937 336 aaKnown RBP14.1□□□□□ -0.15
SHOX2-205ENST00000490689 CHRNDQ07001 517 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 NLRP10Q86W26 655 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 INTS9Q9NV88 658 aaKnown RBP14.1□□□□□ -0.15
SHOX2-205ENST00000490689 NKIRAS1Q9NYS0 192 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 ASIC3Q9UHC3 531 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 CAPN11Q9UMQ6 739 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 ZBTB1Q9Y2K1 713 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 ATP6V0A2Q9Y487 856 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 PIK3C2BO00750 1634 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 TBX2Q13207 712 aaPredicted RBP14.1□□□□□ -0.15
SHOX2-205ENST00000490689 ADAM9Q13443 819 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 FAM26FQ5R3K3 315 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 GSTA5Q7RTV2 222 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 NEK8Q86SG6 692 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHOX2-205ENST00000490689 NLRP3Q96P20 1036 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 AMFRQ9UKV5 643 aa14.1□□□□□ -0.15
SHOX2-205ENST00000490689 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 H2AFZP0C0S5 128 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 TRAPPC10P48553 1259 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 SETDB1Q15047 1291 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 H2AFVQ71UI9 128 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 ERMNQ8TAM6 284 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 IFT74Q96LB3 600 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 CCT8L2Q96SF2 557 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 DDX47Q9H0S4 455 aaKnown RBP14.09□□□□□ -0.15
SHOX2-205ENST00000490689 KLC4Q9NSK0 619 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 RBM12Q9NTZ6 932 aaKnown RBP14.09□□□□□ -0.15
SHOX2-205ENST00000490689 UTYO14607 1347 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 SLC8A1P32418 973 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 SLC1A4P43007 532 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 HDAC7Q8WUI4 952 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 ZIM3Q96PE6 472 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 KCND1Q9NSA2 647 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 DLC1Q96QB1 1528 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 PLEKHG1Q9ULL1 1385 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 SALL1Q9NSC2 1324 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 TARSL2A2RTX5 802 aaKnown RBP14.09□□□□□ -0.15
SHOX2-205ENST00000490689 PPP1R37O75864 691 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 MAEAQ7L5Y9 396 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 HS2ST1Q7LGA3 356 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 PCDHA4Q9UN74 947 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.09□□□□□ -0.15
SHOX2-205ENST00000490689 CEP83Q9Y592 693 aa14.09□□□□□ -0.15
SHOX2-205ENST00000490689 FRMPD2Q68DX3 1309 aaPredicted RBP14.09□□□□□ -0.15
SHOX2-205ENST00000490689 FAM13AO94988 1023 aa14.08□□□□□ -0.15
SHOX2-205ENST00000490689 CYP2D6P10635 497 aa14.08□□□□□ -0.15
SHOX2-205ENST00000490689 MAGOHP61326 146 aaKnown RBP14.08□□□□□ -0.15
SHOX2-205ENST00000490689 ANKRD40Q6AI12 368 aa14.08□□□□□ -0.15
SHOX2-205ENST00000490689 FMNL3Q8IVF7 1028 aa14.08□□□□□ -0.15
SHOX2-205ENST00000490689 MAGOHBQ96A72 148 aaKnown RBP14.08□□□□□ -0.15
SHOX2-205ENST00000490689 RAB21Q9UL25 225 aa14.08□□□□□ -0.15
SHOX2-205ENST00000490689 HEG1Q9ULI3 1381 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 CDHR2Q9BYE9 1310 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 CHMP2AO43633 222 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 DDAH1O94760 285 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 EPB41P11171 864 aaKnown RBP14.08□□□□□ -0.16
SHOX2-205ENST00000490689 CETN2P41208 172 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 PLCB3Q01970 1234 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 GPBP1Q86WP2 473 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 DYNLL2Q96FJ2 89 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 ELAC2Q9BQ52 826 aaKnown RBP14.08□□□□□ -0.16
SHOX2-205ENST00000490689 CCDC77Q9BR77 488 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 ARMCX3Q9UH62 379 aaPredicted RBP14.08□□□□□ -0.16
SHOX2-205ENST00000490689 PTPN22Q9Y2R2 807 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 MAP3K15Q6ZN16 1313 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 WDR19Q8NEZ3 1342 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 PSMD14O00487 310 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.16
SHOX2-205ENST00000490689 CTNNA2P26232 953 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 TMOD1P28289 359 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 LSP1P33241 339 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 TMTC3Q6ZXV5 915 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 STAG1Q8WVM7 1258 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 LARP4BQ92615 738 aaKnown RBP14.08□□□□□ -0.16
SHOX2-205ENST00000490689 NUCKS1Q9H1E3 243 aaKnown RBP14.08□□□□□ -0.16
SHOX2-205ENST00000490689 PANK4Q9NVE7 773 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 GGT7Q9UJ14 662 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 MTUS1Q9ULD2 1270 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 HMGB1P1B2RPK0 211 aaPredicted RBP14.08□□□□□ -0.16
SHOX2-205ENST00000490689 PRPHP41219 470 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 SEL1L2Q5TEA6 688 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 WDR93Q6P2C0 686 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 TRAPPC11Q7Z392 1133 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 CADPS2Q86UW7 1296 aa14.08□□□□□ -0.16
SHOX2-205ENST00000490689 RPGRQ92834 1020 aaKnown RBP14.08□□□□□ -0.16
SHOX2-205ENST00000490689 RNPC3Q96LT9 517 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms