RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ZBED4O75132 1171 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 SNAI1O95863 264 aaPredicted RBP8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 PTGS1P23219 599 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 SLC16A2P36021 539 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 NOVP48745 357 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 C9orf50Q5SZB4 431 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 CWC27Q6UX04 472 aaKnown RBP8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 TRIM46Q7Z4K8 759 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 TBC1D10CQ8IV04 446 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 ABRAQ8N0Z2 381 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 EHBP1Q8NDI1 1231 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 GMCL1P1Q8NEA9 526 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 LENG1Q96BZ8 264 aaPredicted RBP8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 TTYH1Q9H313 450 aaPredicted RBP8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 SLC38A10Q9HBR0 1119 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 GPCPD1Q9NPB8 672 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 TOMM22Q9NS69 142 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 FAM217BQ9NTX9 383 aaPredicted RBP8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 NXF1Q9UBU9 619 aaKnown RBP8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 FEM1BQ9UK73 627 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 PLIN4Q96Q06 1357 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 CCDC171Q6TFL3 1326 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 DNAJC25-GNG10A0A024R161 153 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 ORC4O43929 436 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 SLC3A2P08195 630 aaKnown RBP8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 GSPT1P15170 499 aaKnown RBP8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 CAPN2P17655 700 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 ITGB8P26012 769 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 CNTN2Q02246 1040 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 AAMPQ13685 434 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 KCTD2Q14681 263 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 MUM1L1Q5H9M0 696 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 TMEM63BQ5T3F8 832 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 RCSD1Q6JBY9 416 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 CCDC174Q6PII3 467 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 SKAP1Q86WV1 359 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 NPAS3Q8IXF0 933 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 STAG1Q8WVM7 1258 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 FERMT2Q96AC1 680 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 TMEM47Q9BQJ4 181 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 ZKSCAN3Q9BRR0 538 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 TINF2Q9BSI4 451 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 ZNF287Q9HBT7 754 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 ISY1Q9ULR0 285 aaKnown RBP8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 STX8Q9UNK0 236 aa8.65□□□□□ -1.02
PRPF4B-208ENST00000490653 TTC28Q96AY4 2481 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 PLXNA1Q9UIW2 1896 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 FRMPD3Q5JV73 1810 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 FRMPD2Q68DX3 1309 aaPredicted RBP8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 ATP2A1O14983 1001 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 SEPT4O43236 478 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 ADCY6O43306 1168 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 PGK1P00558 417 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 CLCN1P35523 988 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 ADCYAP1R1P41586 468 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 SLC1A4P43007 532 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 EPHB4P54760 987 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 LRRC41Q15345 812 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 FAM109BQ6ICB4 259 aaPredicted RBP8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 DDX11Q96FC9 970 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 TEX13BQ9BXU2 312 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 CPVLQ9H3G5 476 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 HOMER2Q9NSB8 354 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 PRR12Q9ULL5 1215 aa8.64□□□□□ -1.03
PRPF4B-208ENST00000490653 NEDD4P46934 1319 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 MCM3APO60318 1980 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 MYADML2A6NDP7 307 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 CAPN5O15484 640 aaPredicted RBP8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 ALAS1P13196 640 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 BMP1P13497 986 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 RTP1P59025 263 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 IKQ13123 557 aaPredicted RBP8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 SHHQ15465 462 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 AKNAD1Q5T1N1 836 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 SLC39A5Q6ZMH5 540 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 SH3RF1Q7Z6J0 888 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 CHURC1Q8WUH1 139 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 TRERF1Q96PN7 1200 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 CDX2Q99626 313 aaPredicted RBP8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 UBA5Q9GZZ9 404 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 TCP11L1Q9NUJ3 509 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 SLC5A4Q9NY91 659 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 DIS3Q9Y2L1 958 aaKnown RBP8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 CTDP1Q9Y5B0 961 aaPredicted RBP8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 ZNF236Q9UL36 1845 aa8.63□□□□□ -1.03
PRPF4B-208ENST00000490653 ASTN1O14525 1302 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 LTBP2Q14767 1821 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 TRIM43BA6NCK2 446 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 B4E1Z4 1266 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 DNM1LO00429 736 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 ZNF213O14771 459 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 GOLGA8HP0CJ92 632 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 TOP1P11387 765 aaKnown RBP8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 STAT2P52630 851 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 SH3BP2P78314 561 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 PTH1RQ03431 593 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms