RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-207ENST00000490516 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
EXOSC3-207ENST00000490516 MYH7P12883 1935 aa16.38■□□□□ 0.21
EXOSC3-207ENST00000490516 RALGAPA2Q2PPJ7 1873 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 TMEM232C9JQI7 657 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 H3BNC9 293 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 STXBP3O00186 592 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 CHGBP05060 677 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 TRIM27P14373 513 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 SNAP25P60880 206 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 IKBKEQ14164 716 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 ASCL5Q7RTU5 278 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 COPS5Q92905 334 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-207ENST00000490516 RBM47A0AV96 593 aaKnown RBP16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 H0Y858 1186 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 CKBP12277 381 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 BMP3P12645 472 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 HTRA4P83105 476 aaPredicted RBP16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 ZXDAP98168 799 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 TKFCQ3LXA3 575 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 NSMFQ6X4W1 530 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 DDRGK1Q96HY6 314 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 TLR9Q9NR96 1032 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 SLC4A4Q9Y6R1 1079 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 RIF1Q5UIP0 2472 aaKnown RBP16.36■□□□□ 0.21
EXOSC3-207ENST00000490516 FAM186AA6NE01 2351 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 IGKV6D-41A0A0C4DH26 115 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 A6NJR5 290 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 EFCAB14O75071 495 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 FDX1P10109 184 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 ADD2P35612 726 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 ALDH5A1P51649 535 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 CTC1Q2NKJ3 1217 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 MYOCDQ8IZQ8 938 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 MKL1Q969V6 931 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 RAD50Q92878 1312 aa16.35■□□□□ 0.21
EXOSC3-207ENST00000490516 KPNA6O60684 536 aa16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 PARNO95453 639 aaKnown RBP16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 STAT2P52630 851 aa16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 TMEM192Q8IY95 271 aa16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 GMCL1P1Q8NEA9 526 aa16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 SAMD11Q96NU1 681 aa16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 MKNK2Q9HBH9 465 aa16.34■□□□□ 0.21
EXOSC3-207ENST00000490516 DMDP11532 3685 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 TBX10O75333 385 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 RGS20O76081 388 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 AVPR2P30518 371 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 GTF2F1P35269 517 aaKnown RBP eCLIP16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 ID4P47928 161 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 RBL2Q08999 1139 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 HYAL1Q12794 435 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 IKQ13123 557 aaPredicted RBP16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 SMAD4Q13485 552 aaKnown RBP16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 MBTPS1Q14703 1052 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 PPP2R5BQ15173 497 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 TRAF7Q6Q0C0 670 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 IRF2BPLQ9H1B7 796 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 CACNA1BQ00975 2339 aa16.33■□□□□ 0.2
EXOSC3-207ENST00000490516 PRR23AA6NEV1 266 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 PROB1E7EW31 1015 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 ANP32CO43423 234 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 NCK2O43639 380 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 AMHP03971 560 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 BAATQ14032 418 aaPredicted RBP16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 FBXO11Q86XK2 927 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 MTMR4Q9NYA4 1195 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 ARPP21Q9UBL0 812 aaPredicted RBP16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 TRPC6Q9Y210 931 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 EXOC6BQ9Y2D4 811 aa16.32■□□□□ 0.2
EXOSC3-207ENST00000490516 NKRFO15226 690 aaKnown RBP eCLIP16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 LINC01565O15544 149 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 LGR5O75473 907 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 ZNF618Q5T7W0 954 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 SESTD1Q86VW0 696 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 TMEM57Q8N5G2 664 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 CHURC1Q8WUH1 139 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 WNT8BQ93098 351 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 IGFLR1Q9H665 355 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 ADD3Q9UEY8 706 aaKnown RBP16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 CD207Q9UJ71 328 aa16.31■□□□□ 0.2
EXOSC3-207ENST00000490516 VPS13AQ96RL7 3174 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms