RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 TIMP1P01033 207 aa21.3■■□□□ 1
COL9A2-209ENST00000490132 HSD17B4P51659 736 aa21.3■■□□□ 1
COL9A2-209ENST00000490132 MRPL12P52815 198 aaKnown RBP21.3■■□□□ 1
COL9A2-209ENST00000490132 GHRHRQ02643 423 aa21.3■■□□□ 1
COL9A2-209ENST00000490132 ITGA7Q13683 1181 aa21.3■■□□□ 1
COL9A2-209ENST00000490132 HOMER1Q86YM7 354 aa21.3■■□□□ 1
COL9A2-209ENST00000490132 PIGSQ96S52 555 aa21.3■■□□□ 1
COL9A2-209ENST00000490132 ANO2Q9NQ90 1003 aa21.3■■□□□ 1
COL9A2-209ENST00000490132 FPGSQ05932 587 aa21.29■■□□□ 1
COL9A2-209ENST00000490132 NECTIN1Q15223 517 aa21.29■■□□□ 1
COL9A2-209ENST00000490132 CREB3L3Q68CJ9 461 aa21.29■■□□□ 1
COL9A2-209ENST00000490132 CATIPQ7Z7H3 387 aa21.29■■□□□ 1
COL9A2-209ENST00000490132 DEFB123Q8N688 67 aa21.29■■□□□ 1
COL9A2-209ENST00000490132 NSUN6Q8TEA1 469 aaKnown RBP21.29■■□□□ 1
COL9A2-209ENST00000490132 RMDN3Q96TC7 470 aa21.29■■□□□ 1
COL9A2-209ENST00000490132 MYL10Q9BUA6 226 aa21.29■■□□□ 1
COL9A2-209ENST00000490132 PCDHA1Q9Y5I3 950 aa21.29■■□□□ 1
COL9A2-209ENST00000490132 LAMA2P24043 3122 aaKnown RBP21.29■■□□□ 1
COL9A2-209ENST00000490132 NKRFO15226 690 aaKnown RBP eCLIP21.28■■□□□ 1
COL9A2-209ENST00000490132 TLR3O15455 904 aaKnown RBP21.28■■□□□ 1
COL9A2-209ENST00000490132 PRC1O43663 620 aa21.28■■□□□ 1
COL9A2-209ENST00000490132 TXNP10599 105 aaKnown RBP21.28■■□□□ 1
COL9A2-209ENST00000490132 EIF2AK2P19525 551 aaKnown RBP21.28■■□□□ 1
COL9A2-209ENST00000490132 CPT1AP50416 773 aa21.28■■□□□ 1
COL9A2-209ENST00000490132 PURAQ00577 322 aaKnown RBP21.28■■□□□ 1
COL9A2-209ENST00000490132 ZNF654Q8IZM8 581 aa21.28■■□□□ 1
COL9A2-209ENST00000490132 PXMP2Q9NR77 195 aa21.28■■□□□ 1
COL9A2-209ENST00000490132 MYH7BA7E2Y1 1941 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 SH2B2O14492 632 aaPredicted RBP21.27■■□□□ 1
COL9A2-209ENST00000490132 MYL3P08590 195 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 TTLL4Q14679 1199 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 MFSD5Q6N075 450 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 CCDC62Q6P9F0 684 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 CASC1Q6TDU7 716 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 IWS1Q96ST2 819 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 MTA3Q9BTC8 594 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 PPP1R12CQ9BZL4 782 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 POLR3EQ9NVU0 708 aa21.27■■□□□ 1
COL9A2-209ENST00000490132 B4GALT4O60513 344 aa21.26■□□□□ 0.99
COL9A2-209ENST00000490132 DDAH1O94760 285 aa21.26■□□□□ 0.99
COL9A2-209ENST00000490132 MCM5P33992 734 aa21.26■□□□□ 0.99
COL9A2-209ENST00000490132 ARHGEF16Q5VV41 709 aa21.26■□□□□ 0.99
COL9A2-209ENST00000490132 SEPT14Q6ZU15 432 aa21.26■□□□□ 0.99
COL9A2-209ENST00000490132 TRPV6Q9H1D0 765 aa21.26■□□□□ 0.99
COL9A2-209ENST00000490132 MTMR10Q9NXD2 777 aa21.26■□□□□ 0.99
COL9A2-209ENST00000490132 PNMA6FA0A0J9YX94 578 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 A6NJR5 290 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 NR3C2P08235 984 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 HOXA13P31271 388 aaPredicted RBP21.25■□□□□ 0.99
COL9A2-209ENST00000490132 STXBP2Q15833 593 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 LY6KQ17RY6 165 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 PIBF1Q8WXW3 757 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 TMEM87BQ96K49 555 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 RNPC3Q96LT9 517 aaKnown RBP21.25■□□□□ 0.99
COL9A2-209ENST00000490132 MAP3K14Q99558 947 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 UMODL1Q5DID0 1318 aa21.25■□□□□ 0.99
COL9A2-209ENST00000490132 CSF2RAP15509 400 aa21.24■□□□□ 0.99
COL9A2-209ENST00000490132 CYP2C18P33260 490 aa21.24■□□□□ 0.99
COL9A2-209ENST00000490132 ARHGAP1Q07960 439 aa21.24■□□□□ 0.99
COL9A2-209ENST00000490132 IL31RAQ8NI17 732 aa21.24■□□□□ 0.99
COL9A2-209ENST00000490132 PPP1R13LQ8WUF5 828 aa21.24■□□□□ 0.99
COL9A2-209ENST00000490132 PDCD2LQ9BRP1 358 aa21.24■□□□□ 0.99
COL9A2-209ENST00000490132 MTG1Q9BT17 334 aaPredicted RBP21.24■□□□□ 0.99
COL9A2-209ENST00000490132 SEZ6LQ9BYH1 1024 aa21.24■□□□□ 0.99
COL9A2-209ENST00000490132 LRRC2Q9BYS8 371 aa21.24■□□□□ 0.99
COL9A2-209ENST00000490132 ALDH8A1Q9H2A2 487 aaPredicted RBP21.24■□□□□ 0.99
COL9A2-209ENST00000490132 PPIGQ13427 754 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL9A2-209ENST00000490132 C16orf59Q7L2K0 433 aa21.23■□□□□ 0.99
COL9A2-209ENST00000490132 SAMD3Q8N6K7 520 aa21.23■□□□□ 0.99
COL9A2-209ENST00000490132 CTCFLQ8NI51 663 aaPredicted RBP21.23■□□□□ 0.99
COL9A2-209ENST00000490132 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL9A2-209ENST00000490132 NOC4LQ9BVI4 516 aaKnown RBP21.23■□□□□ 0.99
COL9A2-209ENST00000490132 SPZ1Q9BXG8 430 aa21.23■□□□□ 0.99
COL9A2-209ENST00000490132 HIPK3Q9H422 1215 aa21.23■□□□□ 0.99
COL9A2-209ENST00000490132 MAP3K20Q9NYL2 800 aaKnown RBP21.23■□□□□ 0.99
COL9A2-209ENST00000490132 CDC45O75419 566 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 EIF3JO75822 258 aaKnown RBP21.22■□□□□ 0.99
COL9A2-209ENST00000490132 RGS20O76081 388 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 PLEKHA8P1O95397 391 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 RXRAP19793 462 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 LIFRP42702 1097 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 BRDTQ58F21 947 aaPredicted RBP21.22■□□□□ 0.99
COL9A2-209ENST00000490132 FAM109BQ6ICB4 259 aaPredicted RBP21.22■□□□□ 0.99
COL9A2-209ENST00000490132 NFXL1Q6ZNB6 911 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 RAB11FIP4Q86YS3 637 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 TMEM199Q8N511 208 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 AFG1LQ8WV93 481 aa21.22■□□□□ 0.99
COL9A2-209ENST00000490132 TRMT13Q9NUP7 481 aaKnown RBP21.22■□□□□ 0.99
COL9A2-209ENST00000490132 DDX41Q9UJV9 622 aaKnown RBP21.22■□□□□ 0.99
COL9A2-209ENST00000490132 CCDC69A6NI79 296 aa21.21■□□□□ 0.99
COL9A2-209ENST00000490132 GCOM1H8Y6P7 765 aaPredicted RBP21.21■□□□□ 0.99
COL9A2-209ENST00000490132 GH1P01241 217 aa21.21■□□□□ 0.99
COL9A2-209ENST00000490132 MMP3P08254 477 aa21.21■□□□□ 0.99
COL9A2-209ENST00000490132 POLR2MP0CAP2 368 aa21.21■□□□□ 0.99
COL9A2-209ENST00000490132 ACRP10323 421 aa21.21■□□□□ 0.99
COL9A2-209ENST00000490132 MYCLP12524 364 aaPredicted RBP21.21■□□□□ 0.99
COL9A2-209ENST00000490132 KIF5BP33176 963 aa21.21■□□□□ 0.99
COL9A2-209ENST00000490132 SMAD3P84022 425 aaKnown RBP21.21■□□□□ 0.99
COL9A2-209ENST00000490132 TRAF1Q13077 416 aa21.21■□□□□ 0.99
COL9A2-209ENST00000490132 PGM5Q15124 567 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms