RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 KDM3AQ9Y4C1 1321 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 USP11P51784 963 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 MAP3K9P80192 1104 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 TRAF1Q13077 416 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
COL9A1-208ENST00000489611 TATDN1Q6P1N9 297 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 TMEM179Q6ZVK1 233 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 LARP4BQ92615 738 aaKnown RBP16.72■□□□□ 0.27
COL9A1-208ENST00000489611 TAB2Q9NYJ8 693 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 STK24Q9Y6E0 443 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 NFKBIEO00221 500 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 RAD17O75943 681 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 FXR1P51114 621 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL9A1-208ENST00000489611 AP3B2Q13367 1082 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 PTPN21Q16825 1174 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 OR8K1Q8NGG5 319 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 ZNF507Q8TCN5 953 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 CPLX3Q8WVH0 158 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 UBXN4Q92575 508 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 ARGLU1Q9NWB6 273 aaPredicted RBP16.72■□□□□ 0.27
COL9A1-208ENST00000489611 TMEM260Q9NX78 707 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 OGFRQ9NZT2 677 aa16.72■□□□□ 0.27
COL9A1-208ENST00000489611 ZNF646O15015 1829 aaPredicted RBP16.71■□□□□ 0.27
COL9A1-208ENST00000489611 ADAMTSL1Q8N6G6 1762 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 SOWAHDA6NJG2 315 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 ENTPD3O75355 529 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 KRT9P35527 623 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 EIF6P56537 245 aaKnown RBP16.71■□□□□ 0.27
COL9A1-208ENST00000489611 FIGNQ5HY92 759 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 GMCL1P1Q8NEA9 526 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 TAOK3Q9H2K8 898 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 DDX25Q9UHL0 483 aaKnown RBP16.71■□□□□ 0.27
COL9A1-208ENST00000489611 CAPN11Q9UMQ6 739 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 MAPK8IP1Q9UQF2 711 aa16.71■□□□□ 0.27
COL9A1-208ENST00000489611 LUC7L2Q9Y383 392 aaKnown RBP16.71■□□□□ 0.27
COL9A1-208ENST00000489611 ATRNL1Q5VV63 1379 aa16.71■□□□□ 0.26
COL9A1-208ENST00000489611 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 SLC1A4P43007 532 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 TNNI2P48788 182 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 LRRC63Q05C16 580 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 GRB10Q13322 594 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 HYIQ5T013 277 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 RAD9BQ6WBX8 426 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
COL9A1-208ENST00000489611 RAD54LQ92698 747 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 DNAJC7Q99615 494 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 TUBGCP2Q9BSJ2 902 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 NFIAQ12857 509 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 ELF2Q15723 593 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 TMEM119Q4V9L6 283 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 ARHGAP29Q52LW3 1261 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 ZSCAN29Q8IWY8 852 aaPredicted RBP16.7■□□□□ 0.26
COL9A1-208ENST00000489611 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 GMCL1Q96IK5 515 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 PLIN2Q99541 437 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 DUSP9Q99956 384 aaKnown RBP16.7■□□□□ 0.26
COL9A1-208ENST00000489611 BMP2KQ9NSY1 1161 aaPredicted RBP16.7■□□□□ 0.26
COL9A1-208ENST00000489611 BLOC1S4Q9NUP1 217 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 MRFAP1Q9Y605 127 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 ARFGEF1Q9Y6D6 1849 aa16.7■□□□□ 0.26
COL9A1-208ENST00000489611 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
COL9A1-208ENST00000489611 CYP3A7-CYP3A51PA0A087WV96 503 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 TRIM49BA6NDI0 452 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 PSMD14O00487 310 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 SLC37A4O43826 429 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 MARCH6O60337 910 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 CYP3A7P24462 503 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 SLFN12Q8IYM2 578 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 KCTD17Q8N5Z5 321 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 SNX29Q8TEQ0 813 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 VPS33BQ9H267 617 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 PCDHA12Q9UN75 941 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 MYH7BA7E2Y1 1941 aa16.69■□□□□ 0.26
COL9A1-208ENST00000489611 A0A1W2PQJ5 194 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 USP17L10C9JJH3 530 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 PPP1R11O60927 126 aaPredicted RBP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 TDP2O95551 362 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 FOSP01100 380 aaPredicted RBP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 RBM5P52756 815 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 ATP2B2Q01814 1243 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 RASSF7Q02833 373 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 STK4Q13043 487 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 FKBP15Q5T1M5 1219 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 SLFN13Q68D06 897 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 ZNF662Q6ZS27 426 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 LRRC15Q8TF66 581 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 FHDC1Q9C0D6 1143 aaPredicted RBP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 ZNHIT6Q9NWK9 470 aaKnown RBP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
COL9A1-208ENST00000489611 TBX3O15119 743 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 TADA3O75528 432 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 KIF20AO95235 890 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 H2AFXP16104 143 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms