RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 KIR3DS1Q14943 382 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 RTP2Q5QGT7 225 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 ZNF513Q8N8E2 541 aaPredicted RBP6.14□□□□□ -1.43
XRN1-213ENST00000489241 ZDHHC15Q96MV8 337 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 ZCCHC4Q9H5U6 513 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 TNFRSF12AQ9NP84 129 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 KLHL14Q9P2G3 628 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 IMPACTQ9P2X3 320 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 APEX2Q9UBZ4 518 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 CGGBP1Q9UFW8 167 aaPredicted RBP6.14□□□□□ -1.43
XRN1-213ENST00000489241 ACSL6Q9UKU0 697 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 PRKAB1Q9Y478 270 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 COL4A3BPQ9Y5P4 624 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 PTCH2Q9Y6C5 1203 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 B8ZZF3 427 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 PRRG2O14669 202 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 VAMP4O75379 141 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 KCNH1O95259 989 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 BMP7P18075 431 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 CDR1P51861 262 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 CYP4F8P98187 520 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 HSP90AA2PQ14568 343 aaPredicted RBP6.13□□□□□ -1.43
XRN1-213ENST00000489241 RAB3GAP1Q15042 981 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 TKFCQ3LXA3 575 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 TMC6Q7Z403 805 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 TRIM59Q8IWR1 403 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 NAT16Q8N8M0 369 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 ZCRB1Q8TBF4 217 aaKnown RBP6.13□□□□□ -1.43
XRN1-213ENST00000489241 MZB1Q8WU39 189 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 KCNC2Q96PR1 638 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 JMJD8Q96S16 334 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 SPATA9Q9BWV2 254 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 SLKQ9H2G2 1235 aaPredicted RBP6.13□□□□□ -1.43
XRN1-213ENST00000489241 SPC25Q9HBM1 224 aa6.13□□□□□ -1.43
XRN1-213ENST00000489241 NOP58Q9Y2X3 529 aaKnown RBP6.13□□□□□ -1.43
XRN1-213ENST00000489241 A0A1W2PQU0 124 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 NUDT19A8MXV4 375 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 TRIM13O60858 407 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 ITGAVP06756 1048 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 GSTM1P09488 218 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 IBSPP21815 317 aaPredicted RBP6.12□□□□□ -1.43
XRN1-213ENST00000489241 AFF3P51826 1226 aaKnown RBP6.12□□□□□ -1.43
XRN1-213ENST00000489241 CYP2R1Q6VVX0 501 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 DACT3Q96B18 629 aaPredicted RBP6.12□□□□□ -1.43
XRN1-213ENST00000489241 MRGPRX3Q96LB0 322 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 CCDC140Q96MF4 163 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 FEZ1Q99689 392 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 SLC12A9Q9BXP2 914 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 PCDH12Q9NPG4 1184 aa6.12□□□□□ -1.43
XRN1-213ENST00000489241 PPP1R12AO14974 1030 aaPredicted RBP6.11□□□□□ -1.43
XRN1-213ENST00000489241 RAB11FIP3O75154 756 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 CD3EP07766 207 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 FAM153BP0C7A2 387 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 HOXC12P31275 282 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 DPY19L1Q2PZI1 675 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 ZNF227Q86WZ6 799 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 MARCH10Q8NA82 808 aaPredicted RBP6.11□□□□□ -1.43
XRN1-213ENST00000489241 TMEM52Q8NDY8 209 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 PANK1Q8TE04 598 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 C20orf173Q96LM9 149 aa6.11□□□□□ -1.43
XRN1-213ENST00000489241 IPO9Q96P70 1041 aaKnown RBP6.11□□□□□ -1.43
XRN1-213ENST00000489241 AURKAO14965 403 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 ADCY3O60266 1144 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 CPP00450 1065 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 MASP1P48740 699 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 ANAPC15P60006 121 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 PPP2R2AP63151 447 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 CBX2Q14781 532 aaPredicted RBP6.1□□□□□ -1.43
XRN1-213ENST00000489241 LONRF2Q1L5Z9 754 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 PLEKHN1Q494U1 663 aaPredicted RBP6.1□□□□□ -1.43
XRN1-213ENST00000489241 ZC3H12BQ5HYM0 836 aaKnown RBP6.1□□□□□ -1.43
XRN1-213ENST00000489241 HLA-DQA1Q5Y7H0 255 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 GTF2IRD2BQ6EKJ0 949 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 RPTNQ6XPR3 784 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 GTF2IRD2Q86UP8 949 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 LDHDQ86WU2 507 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 IGDCC3Q8IVU1 814 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 FCRL3Q96P31 734 aaPredicted RBP6.1□□□□□ -1.43
XRN1-213ENST00000489241 AARSD1Q9BTE6 412 aaKnown RBP6.1□□□□□ -1.43
XRN1-213ENST00000489241 TMX1Q9H3N1 280 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 EPB41L4AQ9HCS5 686 aaPredicted RBP6.1□□□□□ -1.43
XRN1-213ENST00000489241 CYP26B1Q9NR63 512 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 BACE2Q9Y5Z0 518 aa6.1□□□□□ -1.43
XRN1-213ENST00000489241 TRAV20A0A0B4J274 112 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 A0A0G2JLL6 359 aaPredicted RBP6.09□□□□□ -1.43
XRN1-213ENST00000489241 A0A1W2PQ27 194 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 A0A1W2PQ64 194 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 A0A1W2PQC6 194 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 A0A1W2PQD8 194 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 C2orf71A6NGG8 1288 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 FGF10O15520 208 aaPredicted RBP6.09□□□□□ -1.43
XRN1-213ENST00000489241 ASMTLO95671 621 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 SEPHS1P49903 392 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 AMPD3Q01432 767 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 MVKQ03426 396 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 NR1I3Q14994 352 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 TCEA2Q15560 299 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 EEF1DP3Q658K8 133 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 CNKSR3Q6P9H4 555 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 FAM129CQ86XR2 697 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms