RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 SNAPC2Q13487 334 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 CALCRLQ16602 461 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 DTHD1Q6ZMT9 781 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 MTMR9Q96QG7 549 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 TEX13BQ9BXU2 312 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 RNF146Q9NTX7 359 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 COL20A1Q9P218 1284 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 PEX10O60683 326 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 LETM1O95202 739 aaPredicted RBP12.37□□□□□ -0.43
COL21A1-211ENST00000488912 TPM2P07951 284 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 IRX3P78415 501 aaPredicted RBP12.37□□□□□ -0.43
COL21A1-211ENST00000488912 GHRHRQ02643 423 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 MKRN3Q13064 507 aaKnown RBP12.37□□□□□ -0.43
COL21A1-211ENST00000488912 PLS1Q14651 629 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 LRSAM1Q6UWE0 723 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 FASTKD5Q7L8L6 764 aaKnown RBP12.37□□□□□ -0.43
COL21A1-211ENST00000488912 MCF2L2Q86YR7 1114 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
COL21A1-211ENST00000488912 CYP3A7-CYP3A51PA0A087WV96 503 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 A0A087X0B3 334 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 CYP3A7P24462 503 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 LONP1P36776 959 aaKnown RBP12.37□□□□□ -0.43
COL21A1-211ENST00000488912 UBXN2AP68543 259 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 GPAT2Q6NUI2 795 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 LBX2Q6XYB7 198 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 RBM43Q6ZSC3 357 aaKnown RBP12.37□□□□□ -0.43
COL21A1-211ENST00000488912 PDILTQ8N807 584 aa12.37□□□□□ -0.43
COL21A1-211ENST00000488912 NAP1L4Q99733 375 aaKnown RBP12.37□□□□□ -0.43
COL21A1-211ENST00000488912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
COL21A1-211ENST00000488912 FAM86B1E9PN63 330 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
COL21A1-211ENST00000488912 FAM86B2P0C5J1 330 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 CDC25AP30304 524 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 RPS6P62753 249 aaKnown RBP12.36□□□□□ -0.43
COL21A1-211ENST00000488912 MOXD1Q6UVY6 613 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 SLC30A10Q6XR72 485 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 MBOAT7Q96N66 472 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 BTBD7Q9P203 1132 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 LCTP09848 1927 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 PP2D1A8MPX8 630 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 CYP3A4P08684 503 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 STAT3P40763 770 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 TECP42680 631 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 TXKP42681 527 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 HERVK_113P62684 666 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 PRR16Q569H4 304 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 NSMFQ6X4W1 530 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 SYTL5Q8TDW5 730 aaPredicted RBP12.36□□□□□ -0.43
COL21A1-211ENST00000488912 HAS1Q92839 578 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 GJA10Q969M2 543 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 LENG9Q96B70 501 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 TIGD1Q96MW7 591 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 SDF4Q9BRK5 362 aa12.36□□□□□ -0.43
COL21A1-211ENST00000488912 CTAGE5O15320 804 aa12.35□□□□□ -0.43
COL21A1-211ENST00000488912 CIITAP33076 1130 aa12.35□□□□□ -0.43
COL21A1-211ENST00000488912 RNF207Q6ZRF8 634 aa12.35□□□□□ -0.43
COL21A1-211ENST00000488912 MB21D1Q8N884 522 aa12.35□□□□□ -0.43
COL21A1-211ENST00000488912 CYP2W1Q8TAV3 490 aa12.35□□□□□ -0.43
COL21A1-211ENST00000488912 ERCC4Q92889 916 aaPredicted RBP12.35□□□□□ -0.43
COL21A1-211ENST00000488912 UIMC1Q96RL1 719 aa12.35□□□□□ -0.43
COL21A1-211ENST00000488912 EHMT1Q9H9B1 1298 aa12.35□□□□□ -0.43
COL21A1-211ENST00000488912 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
COL21A1-211ENST00000488912 RPTORQ8N122 1335 aa12.35□□□□□ -0.43
COL21A1-211ENST00000488912 HUNKP57058 714 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 PABPC4Q13310 644 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL21A1-211ENST00000488912 Q4G0T1 1027 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 PAGR1Q9BTK6 254 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 FUCA2Q9BTY2 467 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 ACAD9Q9H845 621 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 KCNMB3Q9NPA1 279 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 MAP3K20Q9NYL2 800 aaKnown RBP12.34□□□□□ -0.43
COL21A1-211ENST00000488912 CCL15-CCL14A0A0B4J2E2 113 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 CETPP11597 493 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 FXR2P51116 673 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL21A1-211ENST00000488912 GTF2A2P52657 109 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
COL21A1-211ENST00000488912 CCL15Q16663 113 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 SPRYD7Q5W111 196 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 SAMD3Q8N6K7 520 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 IGSF22Q8N9C0 903 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 IL31RAQ8NI17 732 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 DHX58Q96C10 678 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 AK8Q96MA6 479 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 PURBQ96QR8 312 aaKnown RBP12.34□□□□□ -0.43
COL21A1-211ENST00000488912 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
COL21A1-211ENST00000488912 SERTAD1Q9UHV2 236 aa12.34□□□□□ -0.43
COL21A1-211ENST00000488912 IGLV3-22A0A075B6J6 115 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 POTEMA6NI47 508 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
COL21A1-211ENST00000488912 CNMDO75829 334 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 ZBTB48P10074 688 aaPredicted RBP12.33□□□□□ -0.44
COL21A1-211ENST00000488912 OSBPP22059 807 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 ZNF76P36508 570 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms