RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CHURC1Q8WUH1 139 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 PHF20Q9BVI0 1012 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 FEM1BQ9UK73 627 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 PHLPP2Q6ZVD8 1323 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 VGLL3A8MV65 326 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 SPTLC2O15270 562 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 URI1O94763 535 aaPredicted RBP15□□□□□ -0.01
CHD1L-208ENST00000488864 TREML2Q5T2D2 321 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 TMCO3Q6UWJ1 677 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 REXO1L1PQ8IX06 675 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 RASGRP4Q8TDF6 673 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 MTMR8Q96EF0 704 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 CARD6Q9BX69 1037 aa15□□□□□ -0.01
CHD1L-208ENST00000488864 TADA3O75528 432 aa14.99□□□□□ -0.01
CHD1L-208ENST00000488864 SAFBQ15424 915 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHD1L-208ENST00000488864 NPY5RQ15761 445 aa14.99□□□□□ -0.01
CHD1L-208ENST00000488864 NOM1Q5C9Z4 860 aaKnown RBP14.99□□□□□ -0.01
CHD1L-208ENST00000488864 RBM46Q8TBY0 533 aaKnown RBP14.99□□□□□ -0.01
CHD1L-208ENST00000488864 WNK4Q96J92 1243 aa14.99□□□□□ -0.01
CHD1L-208ENST00000488864 TULP2O00295 520 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 HUNKP57058 714 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 CREBRFQ8IUR6 639 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 SLF1Q9BQI6 1058 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 PCDHA1Q9Y5I3 950 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 SMCHD1A6NHR9 2005 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 FAM205CA6NFA0 338 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 PFKFB1P16118 471 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 YY1P25490 414 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 TPM4P67936 248 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 PPIL2Q13356 520 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 AXDND1Q5T1B0 1012 aaPredicted RBP14.98□□□□□ -0.01
CHD1L-208ENST00000488864 FAM160B2Q86V87 743 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 CPXCR1Q8N123 301 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 PRPF38AQ8NAV1 312 aaKnown RBP14.98□□□□□ -0.01
CHD1L-208ENST00000488864 MNS1Q8NEH6 495 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 KCNG4Q8TDN1 519 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 C12orf42Q96LP6 360 aa14.98□□□□□ -0.01
CHD1L-208ENST00000488864 SMCO2A6NFE2 343 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 TUBB4AP04350 444 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 FKBP1BP68106 108 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 EARS2Q5JPH6 523 aaKnown RBP14.97□□□□□ -0.01
CHD1L-208ENST00000488864 MYSM1Q5VVJ2 828 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 ATG4CQ96DT6 458 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 TMX1Q9H3N1 280 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 ZCCHC17Q9NP64 241 aaKnown RBP14.97□□□□□ -0.01
CHD1L-208ENST00000488864 POLR3EQ9NVU0 708 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 A0A0G2JLL6 359 aaPredicted RBP14.97□□□□□ -0.01
CHD1L-208ENST00000488864 NRDCO43847 1150 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 SASH3O75995 380 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 YEATS4O95619 227 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 KRT2P35908 639 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 SH3D19Q5HYK7 790 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 PRRT2Q7Z6L0 340 aaPredicted RBP14.97□□□□□ -0.01
CHD1L-208ENST00000488864 FBXO11Q86XK2 927 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 FAM177A1Q8N128 213 aaPredicted RBP14.97□□□□□ -0.01
CHD1L-208ENST00000488864 NEK11Q8NG66 645 aa14.97□□□□□ -0.01
CHD1L-208ENST00000488864 ATP2B1P20020 1258 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 MARCKSP29966 332 aaPredicted RBP14.96□□□□□ -0.01
CHD1L-208ENST00000488864 UBASH3AP57075 661 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 CCDC148Q8NFR7 591 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 AMNQ9BXJ7 453 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 SH3GLB2Q9NR46 395 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 ARGLU1Q9NWB6 273 aaPredicted RBP14.96□□□□□ -0.01
CHD1L-208ENST00000488864 PPP1R9AQ9ULJ8 1098 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 KCNH4Q9UQ05 1017 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 CXCL11O14625 94 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 IKBKBO14920 756 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 PEX10O60683 326 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 NOSTRINQ8IVI9 506 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 BLIDQ8IZY5 108 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 AGBL1Q96MI9 1066 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 UBXN6Q9BZV1 441 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 RANBP17Q9H2T7 1088 aaKnown RBP14.96□□□□□ -0.01
CHD1L-208ENST00000488864 BRMS1Q9HCU9 246 aa14.96□□□□□ -0.01
CHD1L-208ENST00000488864 PTPRFP10586 1907 aa14.96□□□□□ -0.02
CHD1L-208ENST00000488864 PASKQ96RG2 1323 aa14.96□□□□□ -0.02
CHD1L-208ENST00000488864 VWA3AA6NCI4 1184 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 PLA2G6O60733 806 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 SERPINC1P01008 464 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 ANO1Q5XXA6 986 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 ZNF784Q8NCA9 323 aaPredicted RBP14.95□□□□□ -0.02
CHD1L-208ENST00000488864 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 ZMYND12Q9H0C1 365 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 FOXP1Q9H334 677 aaPredicted RBP14.95□□□□□ -0.02
CHD1L-208ENST00000488864 RAVER2Q9HCJ3 691 aaKnown RBP14.95□□□□□ -0.02
CHD1L-208ENST00000488864 PCDHA4Q9UN74 947 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 TBC1D8O95759 1140 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 CMA1P23946 247 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 CALML3P27482 149 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 UBE2SQ16763 222 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 PIK3AP1Q6ZUJ8 805 aa14.95□□□□□ -0.02
CHD1L-208ENST00000488864 CCDC12Q8WUD4 166 aaPredicted RBP14.95□□□□□ -0.02
CHD1L-208ENST00000488864 BIN2Q9UBW5 565 aaPredicted RBP14.95□□□□□ -0.02
CHD1L-208ENST00000488864 EFCAB8A8MWE9 144 aa14.94□□□□□ -0.02
CHD1L-208ENST00000488864 USP17L15C9J2P7 530 aa14.94□□□□□ -0.02
CHD1L-208ENST00000488864 USP17L13C9JLJ4 530 aa14.94□□□□□ -0.02
CHD1L-208ENST00000488864 USP17L11C9JVI0 530 aa14.94□□□□□ -0.02
CHD1L-208ENST00000488864 USP17L18D6R9N7 530 aa14.94□□□□□ -0.02
CHD1L-208ENST00000488864 USP17L22D6RA61 530 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms