RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 EIF2AK2P19525 551 aaKnown RBP20.58■□□□□ 0.89
ITGB1-215ENST00000488494 RXRAP19793 462 aa20.58■□□□□ 0.89
ITGB1-215ENST00000488494 KIF5BP33176 963 aa20.58■□□□□ 0.89
ITGB1-215ENST00000488494 RAB11FIP4Q86YS3 637 aa20.58■□□□□ 0.89
ITGB1-215ENST00000488494 BADQ92934 168 aa20.58■□□□□ 0.89
ITGB1-215ENST00000488494 MAP3K14Q99558 947 aa20.58■□□□□ 0.89
ITGB1-215ENST00000488494 PNMA6FA0A0J9YX94 578 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 ZEB2O60315 1214 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 LIFRP42702 1097 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 GHRHRQ02643 423 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 FAAP100Q0VG06 881 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 ARHGEF16Q5VV41 709 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 OR6J1Q8NGC5 347 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 TOX2Q96NM4 488 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 SPZ1Q9BXG8 430 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 PXMP2Q9NR77 195 aa20.57■□□□□ 0.88
ITGB1-215ENST00000488494 ARVCFO00192 962 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 KIAA0355O15063 1070 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 CABYRO75952 493 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 ARIH2O95376 493 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 PLEKHA8P1O95397 391 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 ITGB8P26012 769 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 HOXA13P31271 388 aaPredicted RBP20.56■□□□□ 0.88
ITGB1-215ENST00000488494 TRAF1Q13077 416 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 RASEFQ8IZ41 740 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 TMTC2Q8N394 836 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 LRCH3Q96II8 777 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 IWS1Q96ST2 819 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 TMEM39AQ9NV64 488 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 SLC12A7Q9Y666 1083 aa20.56■□□□□ 0.88
ITGB1-215ENST00000488494 NKRFO15226 690 aaKnown RBP eCLIP20.55■□□□□ 0.88
ITGB1-215ENST00000488494 CALM1P0DP23 149 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 CALM2P0DP24 149 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 CALM3P0DP25 149 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 TXNP10599 105 aaKnown RBP20.55■□□□□ 0.88
ITGB1-215ENST00000488494 CPT1AP50416 773 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 CDK7P50613 346 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 ADCK5Q3MIX3 580 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 MICU3Q86XE3 530 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 COPS5Q92905 334 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 RRP36Q96EU6 259 aaKnown RBP20.55■□□□□ 0.88
ITGB1-215ENST00000488494 TCEANC2Q96MN5 208 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 NEK1Q96PY6 1258 aa20.55■□□□□ 0.88
ITGB1-215ENST00000488494 GCOM1H8Y6P7 765 aaPredicted RBP20.54■□□□□ 0.88
ITGB1-215ENST00000488494 POLR2MP0CAP2 368 aa20.54■□□□□ 0.88
ITGB1-215ENST00000488494 RAG1P15918 1043 aa20.54■□□□□ 0.88
ITGB1-215ENST00000488494 PSMC6P62333 389 aa20.54■□□□□ 0.88
ITGB1-215ENST00000488494 STXBP2Q15833 593 aa20.54■□□□□ 0.88
ITGB1-215ENST00000488494 SEPT14Q6ZU15 432 aa20.54■□□□□ 0.88
ITGB1-215ENST00000488494 FAM126BQ8IXS8 530 aa20.54■□□□□ 0.88
ITGB1-215ENST00000488494 LZTS2Q9BRK4 669 aa20.54■□□□□ 0.88
ITGB1-215ENST00000488494 SEC63Q9UGP8 760 aaKnown RBP20.54■□□□□ 0.88
ITGB1-215ENST00000488494 TBX21Q9UL17 535 aa20.54■□□□□ 0.88
ITGB1-215ENST00000488494 BAZ2BQ9UIF8 2168 aaKnown RBP20.53■□□□□ 0.88
ITGB1-215ENST00000488494 NR3C2P08235 984 aa20.53■□□□□ 0.88
ITGB1-215ENST00000488494 GNAQP50148 359 aa20.53■□□□□ 0.88
ITGB1-215ENST00000488494 ITGA7Q13683 1181 aa20.53■□□□□ 0.88
ITGB1-215ENST00000488494 KRT32Q14532 448 aa20.53■□□□□ 0.88
ITGB1-215ENST00000488494 LRIT3Q3SXY7 679 aa20.53■□□□□ 0.88
ITGB1-215ENST00000488494 SGMS1Q86VZ5 419 aa20.53■□□□□ 0.88
ITGB1-215ENST00000488494 CMTR1Q8N1G2 835 aaKnown RBP20.53■□□□□ 0.88
ITGB1-215ENST00000488494 IL31RAQ8NI17 732 aa20.53■□□□□ 0.88
ITGB1-215ENST00000488494 MAP3K20Q9NYL2 800 aaKnown RBP20.53■□□□□ 0.88
ITGB1-215ENST00000488494 GRIN2DO15399 1336 aa20.53■□□□□ 0.88
ITGB1-215ENST00000488494 TLR3O15455 904 aaKnown RBP20.52■□□□□ 0.88
ITGB1-215ENST00000488494 MYL3P08590 195 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 PURAQ00577 322 aaKnown RBP20.52■□□□□ 0.88
ITGB1-215ENST00000488494 TSGA10IPQ3SY00 556 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 BRDTQ58F21 947 aaPredicted RBP20.52■□□□□ 0.88
ITGB1-215ENST00000488494 CCDC62Q6P9F0 684 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 APOA5Q6Q788 366 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 FCHSD1Q86WN1 690 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 SRBD1Q8N5C6 995 aaKnown RBP20.52■□□□□ 0.88
ITGB1-215ENST00000488494 SAMD3Q8N6K7 520 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 SLC43A3Q8NBI5 491 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 PDCD2LQ9BRP1 358 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 POLR3EQ9NVU0 708 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 KIAA1217Q5T5P2 1943 aa20.52■□□□□ 0.88
ITGB1-215ENST00000488494 EIF3JO75822 258 aaKnown RBP20.51■□□□□ 0.87
ITGB1-215ENST00000488494 SMARCA1P28370 1054 aa20.51■□□□□ 0.87
ITGB1-215ENST00000488494 PGM5Q15124 567 aa20.51■□□□□ 0.87
ITGB1-215ENST00000488494 LY6KQ17RY6 165 aa20.51■□□□□ 0.87
ITGB1-215ENST00000488494 C9orf50Q5SZB4 431 aa20.51■□□□□ 0.87
ITGB1-215ENST00000488494 TMTC3Q6ZXV5 915 aa20.51■□□□□ 0.87
ITGB1-215ENST00000488494 DHX32Q7L7V1 743 aaKnown RBP20.51■□□□□ 0.87
ITGB1-215ENST00000488494 A6NJR5 290 aa20.5■□□□□ 0.87
ITGB1-215ENST00000488494 MYCLP12524 364 aaPredicted RBP20.5■□□□□ 0.87
ITGB1-215ENST00000488494 EXOSC10Q01780 885 aaKnown RBP20.5■□□□□ 0.87
ITGB1-215ENST00000488494 FPGSQ05932 587 aa20.5■□□□□ 0.87
ITGB1-215ENST00000488494 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
ITGB1-215ENST00000488494 FANCBQ8NB91 859 aa20.5■□□□□ 0.87
ITGB1-215ENST00000488494 MRVI1Q9Y6F6 885 aa20.5■□□□□ 0.87
ITGB1-215ENST00000488494 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 REC8O95072 547 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 TIMP1P01033 207 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 GH1P01241 217 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 CD4P01730 458 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 HSPA4P34932 840 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 EPHB4P54760 987 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms