RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 CXXC1Q9P0U4 656 aaPredicted RBP13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 LOC102724159A0A0B4J2E5 919 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 DLL1O00548 723 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 TLR3O15455 904 aaKnown RBP13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 MYL3P08590 195 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 CYP2C9P11712 490 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 PPIGQ13427 754 aaKnown RBP eCLIP13.11□□□□□ -0.312e-7■■■■■ 26.9
PCYT1A-215ENST00000488235 GRIN2CQ14957 1233 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 PPP2R5BQ15173 497 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 PWP2Q15269 919 aaKnown RBP13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 IFIT1BQ5T764 474 aaKnown RBP13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 CHST3Q7LGC8 479 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 UBAC1Q9BSL1 405 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 ABCB11O95342 1321 aa13.11□□□□□ -0.31
PCYT1A-215ENST00000488235 A6NJR5 290 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 SGSM2O43147 1006 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 DHX16O60231 1041 aaKnown RBP13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 ZEB2O60315 1214 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 TXNP10599 105 aaKnown RBP13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 NT5C2P49902 561 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 FBXO11Q86XK2 927 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 TMEM199Q8N511 208 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 SCLYQ96I15 445 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 PBX4Q9BYU1 374 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 IL23AQ9NPF7 189 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 PNMA2Q9UL42 364 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 RAD50Q92878 1312 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 TTC28Q96AY4 2481 aa13.1□□□□□ -0.31
PCYT1A-215ENST00000488235 SCN10AQ9Y5Y9 1956 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 PALM3A6NDB9 673 aaPredicted RBP13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 E7EWF7 191 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 CYTH3O43739 400 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 CPT1AP50416 773 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 ANTXR2P58335 489 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 ARHGAP1Q07960 439 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 NBPF20Q3BBV1 942 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 SEPT14Q6ZU15 432 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 RMDN3Q96TC7 470 aa13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 GPHNQ9NQX3 736 aaPredicted RBP13.09□□□□□ -0.31
PCYT1A-215ENST00000488235 CFBP00751 764 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 HSD17B4P51659 736 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 PSRC1Q6PGN9 363 aaPredicted RBP13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 OTOP2Q7RTS6 562 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 MAFAQ8NHW3 353 aaPredicted RBP13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 IL31RAQ8NI17 732 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 HERVK_113Q902F9 699 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 TIFAQ96CG3 184 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 CTAGE1Q96RT6 745 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 ZNF576Q9H609 170 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 POLR3EQ9NVU0 708 aa13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 MRPL11Q9Y3B7 192 aaKnown RBP13.08□□□□□ -0.32
PCYT1A-215ENST00000488235 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 RGS20O76081 388 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 GHRHRQ02643 423 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 TROAPQ12815 778 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 TTLL4Q14679 1199 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 GRM4Q14833 912 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 FAM47CQ5HY64 1035 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 HOMER1Q86YM7 354 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 MB21D2Q8IYB1 491 aaPredicted RBP13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 KAT2BQ92831 832 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 ZFP91Q96JP5 570 aaPredicted RBP13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 PIGSQ96S52 555 aa13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 YBX2Q9Y2T7 364 aaKnown RBP13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
PCYT1A-215ENST00000488235 TMEM265A0A087WTH1 108 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 ZBTB5O15062 677 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 SORBS3O60504 671 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 FGBP02675 491 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 NR3C2P08235 984 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 MMP3P08254 477 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 MYOGP15173 224 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 FOSL2P15408 326 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 RABGGTBP53611 331 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 CHMP4BP1P59074 171 aa13.06□□□□□ -0.32
PCYT1A-215ENST00000488235 ARHGEF16Q5VV41 709 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms