RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SYNE3Q6ZMZ3 975 aa27.47■■□□□ 1.99
RNF38-208ENST00000488058 DHX32Q7L7V1 743 aaKnown RBP27.47■■□□□ 1.99
RNF38-208ENST00000488058 MICU3Q86XE3 530 aa27.47■■□□□ 1.99
RNF38-208ENST00000488058 CMTR1Q8N1G2 835 aaKnown RBP27.47■■□□□ 1.99
RNF38-208ENST00000488058 RRP36Q96EU6 259 aaKnown RBP27.47■■□□□ 1.99
RNF38-208ENST00000488058 SPZ1Q9BXG8 430 aa27.47■■□□□ 1.99
RNF38-208ENST00000488058 PDLIM7Q9NR12 457 aa27.47■■□□□ 1.99
RNF38-208ENST00000488058 Q9Y3F1 56 aa27.47■■□□□ 1.99
RNF38-208ENST00000488058 LTBP2Q14767 1821 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 RBM47A0AV96 593 aaKnown RBP27.46■■□□□ 1.99
RNF38-208ENST00000488058 BMP8BP34820 402 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 HSD17B4P51659 736 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 NKX3-2P78367 333 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 TSGA10IPQ3SY00 556 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 CXCL17Q6UXB2 119 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 SH3RF1Q7Z6J0 888 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 OR6J1Q8NGC5 347 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 SCFD2Q8WU76 684 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 LZTS2Q9BRK4 669 aa27.46■■□□□ 1.99
RNF38-208ENST00000488058 SEC63Q9UGP8 760 aaKnown RBP27.46■■□□□ 1.99
RNF38-208ENST00000488058 ELP1O95163 1332 aa27.45■■□□□ 1.99
RNF38-208ENST00000488058 REC8O95072 547 aa27.45■■□□□ 1.98
RNF38-208ENST00000488058 CLTBP09497 229 aa27.45■■□□□ 1.98
RNF38-208ENST00000488058 SEPT14Q6ZU15 432 aa27.45■■□□□ 1.98
RNF38-208ENST00000488058 SRBD1Q8N5C6 995 aaKnown RBP27.45■■□□□ 1.98
RNF38-208ENST00000488058 PXMP2Q9NR77 195 aa27.45■■□□□ 1.98
RNF38-208ENST00000488058 TRIOBPQ9H2D6 2365 aa27.44■■□□□ 1.98
RNF38-208ENST00000488058 A0A0U1RQG5 324 aaPredicted RBP27.44■■□□□ 1.98
RNF38-208ENST00000488058 A0A1W2PPC1 479 aa27.44■■□□□ 1.98
RNF38-208ENST00000488058 GCOM1H8Y6P7 765 aaPredicted RBP27.44■■□□□ 1.98
RNF38-208ENST00000488058 POLR2MP0CAP2 368 aa27.44■■□□□ 1.98
RNF38-208ENST00000488058 TXNP10599 105 aaKnown RBP27.44■■□□□ 1.98
RNF38-208ENST00000488058 EXOSC10Q01780 885 aaKnown RBP27.44■■□□□ 1.98
RNF38-208ENST00000488058 STXBP2Q15833 593 aa27.44■■□□□ 1.98
RNF38-208ENST00000488058 SGMS1Q86VZ5 419 aa27.44■■□□□ 1.98
RNF38-208ENST00000488058 FCHSD1Q86WN1 690 aa27.44■■□□□ 1.98
RNF38-208ENST00000488058 COPS5Q92905 334 aa27.44■■□□□ 1.98
RNF38-208ENST00000488058 IWS1Q96ST2 819 aa27.44■■□□□ 1.98
RNF38-208ENST00000488058 DCDC2CA8MYV0 355 aa27.43■■□□□ 1.98
RNF38-208ENST00000488058 HSPA4P34932 840 aa27.43■■□□□ 1.98
RNF38-208ENST00000488058 FGD1P98174 961 aa27.43■■□□□ 1.98
RNF38-208ENST00000488058 GHRHRQ02643 423 aa27.43■■□□□ 1.98
RNF38-208ENST00000488058 TTLL4Q14679 1199 aa27.43■■□□□ 1.98
RNF38-208ENST00000488058 CCDC82Q8N4S0 544 aa27.43■■□□□ 1.98
RNF38-208ENST00000488058 FANCBQ8NB91 859 aa27.43■■□□□ 1.98
RNF38-208ENST00000488058 JAKMIP1Q96N16 626 aaKnown RBP27.43■■□□□ 1.98
RNF38-208ENST00000488058 MAP3K20Q9NYL2 800 aaKnown RBP27.43■■□□□ 1.98
RNF38-208ENST00000488058 KIAA1217Q5T5P2 1943 aa27.42■■□□□ 1.98
RNF38-208ENST00000488058 TRIM43BA6NCK2 446 aa27.42■■□□□ 1.98
RNF38-208ENST00000488058 NKRFO15226 690 aaKnown RBP eCLIP27.42■■□□□ 1.98
RNF38-208ENST00000488058 NR3C2P08235 984 aa27.42■■□□□ 1.98
RNF38-208ENST00000488058 HMGB1P09429 215 aaKnown RBP27.42■■□□□ 1.98
RNF38-208ENST00000488058 MYCLP12524 364 aaPredicted RBP27.42■■□□□ 1.98
RNF38-208ENST00000488058 CPA1P15085 419 aa27.42■■□□□ 1.98
RNF38-208ENST00000488058 SMARCA1P28370 1054 aa27.42■■□□□ 1.98
RNF38-208ENST00000488058 SAMD3Q8N6K7 520 aa27.42■■□□□ 1.98
RNF38-208ENST00000488058 TRIM43Q96BQ3 446 aaPredicted RBP27.42■■□□□ 1.98
RNF38-208ENST00000488058 TMEM39AQ9NV64 488 aa27.42■■□□□ 1.98
RNF38-208ENST00000488058 NAP1L2Q9ULW6 460 aaPredicted RBP27.42■■□□□ 1.98
RNF38-208ENST00000488058 SNX14Q9Y5W7 946 aa27.42■■□□□ 1.98
RNF38-208ENST00000488058 MROH7Q68CQ1 1323 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 ARVCFO00192 962 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 CABYRO75952 493 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 ARIH2O95376 493 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 MYL3P08590 195 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 CPT1AP50416 773 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 APOA5Q6Q788 366 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 ANKRD33Q7Z3H0 272 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 BADQ92934 168 aa27.41■■□□□ 1.98
RNF38-208ENST00000488058 hCG_1642624A0A1W2PR95 340 aa27.4■■□□□ 1.98
RNF38-208ENST00000488058 FAAP100Q0VG06 881 aa27.4■■□□□ 1.98
RNF38-208ENST00000488058 TMTC3Q6ZXV5 915 aa27.4■■□□□ 1.98
RNF38-208ENST00000488058 TDHQ8IZJ6 230 aa27.4■■□□□ 1.98
RNF38-208ENST00000488058 TOX2Q96NM4 488 aa27.4■■□□□ 1.98
RNF38-208ENST00000488058 PDCD2LQ9BRP1 358 aa27.4■■□□□ 1.98
RNF38-208ENST00000488058 BRPF3Q9ULD4 1205 aa27.4■■□□□ 1.98
RNF38-208ENST00000488058 DNAH12Q6ZR08 3092 aa27.39■■□□□ 1.98
RNF38-208ENST00000488058 KLF18A0A0U1RQI7 1052 aa27.39■■□□□ 1.98
RNF38-208ENST00000488058 ZBTB43O43298 467 aa27.39■■□□□ 1.98
RNF38-208ENST00000488058 PSMC6P62333 389 aa27.39■■□□□ 1.98
RNF38-208ENST00000488058 BRDTQ58F21 947 aaPredicted RBP27.39■■□□□ 1.98
RNF38-208ENST00000488058 BLOC1S2Q6QNY1 142 aa27.39■■□□□ 1.98
RNF38-208ENST00000488058 KCNB2Q92953 911 aa27.39■■□□□ 1.98
RNF38-208ENST00000488058 POLR3EQ9NVU0 708 aa27.39■■□□□ 1.98
RNF38-208ENST00000488058 TLR3O15455 904 aaKnown RBP27.38■■□□□ 1.97
RNF38-208ENST00000488058 EIF3JO75822 258 aaKnown RBP27.38■■□□□ 1.97
RNF38-208ENST00000488058 RAG1P15918 1043 aa27.38■■□□□ 1.97
RNF38-208ENST00000488058 CDK7P50613 346 aa27.38■■□□□ 1.97
RNF38-208ENST00000488058 ITGA7Q13683 1181 aa27.38■■□□□ 1.97
RNF38-208ENST00000488058 PGM5Q15124 567 aa27.38■■□□□ 1.97
RNF38-208ENST00000488058 RTN1Q16799 776 aa27.38■■□□□ 1.97
RNF38-208ENST00000488058 LY6KQ17RY6 165 aa27.38■■□□□ 1.97
RNF38-208ENST00000488058 GOLGA8AA7E2F4 631 aa27.37■■□□□ 1.97
RNF38-208ENST00000488058 GOLGA8BA8MQT2 603 aa27.37■■□□□ 1.97
RNF38-208ENST00000488058 CCDC62Q6P9F0 684 aa27.37■■□□□ 1.97
RNF38-208ENST00000488058 IL31RAQ8NI17 732 aa27.37■■□□□ 1.97
RNF38-208ENST00000488058 SMARCC2Q8TAQ2 1214 aa27.37■■□□□ 1.97
RNF38-208ENST00000488058 CUL5Q93034 780 aa27.37■■□□□ 1.97
RNF38-208ENST00000488058 ZFP91Q96JP5 570 aaPredicted RBP27.37■■□□□ 1.97
RNF38-208ENST00000488058 RBM28Q9NW13 759 aaKnown RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms