RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 SYNDIG1Q9H7V2 258 aa16.71■□□□□ 0.26
PKD1-220ENST00000487932 KRT26Q7Z3Y9 468 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.7■□□□□ 0.26
PKD1-220ENST00000487932 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 USH1CQ9Y6N9 552 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 IRX4P78413 519 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 USPL1Q5W0Q7 1092 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 RNF139Q8WU17 664 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 PCDHA1Q9Y5I3 950 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 RSBN1LQ6PCB5 846 aaPredicted RBP16.7■□□□□ 0.26
PKD1-220ENST00000487932 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.7■□□□□ 0.26
PKD1-220ENST00000487932 WDR64B1ANS9 1081 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 RAD17O75943 681 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 SLC16A2P36021 539 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 IFNL3Q8IZI9 196 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 LRRC8CQ8TDW0 803 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 COL4A3BPQ9Y5P4 624 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 ESRRBO95718 433 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 SEPT8Q92599 483 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 RPGRIP1Q96KN7 1286 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 LRRC4Q9HBW1 653 aa16.7■□□□□ 0.26
PKD1-220ENST00000487932 ZBBXA8MT70 800 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 CPP00450 1065 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 NSUN2Q08J23 767 aaKnown RBP eCLIP16.69■□□□□ 0.26
PKD1-220ENST00000487932 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 TTC25Q96NG3 672 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 CD58P19256 250 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 CCND2P30279 289 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 ADALQ6DHV7 355 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 TYW1Q9NV66 732 aaKnown RBP16.69■□□□□ 0.26
PKD1-220ENST00000487932 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
PKD1-220ENST00000487932 RWDD4Q6NW29 188 aaKnown RBP16.69■□□□□ 0.26
PKD1-220ENST00000487932 DSTYKQ6XUX3 929 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 CNKSR1Q969H4 720 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 ANLNQ9NQW6 1124 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 MFAP3P55082 362 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 RNF219Q5W0B1 726 aaPredicted RBP16.69■□□□□ 0.26
PKD1-220ENST00000487932 TPX2Q9ULW0 747 aaKnown RBP16.69■□□□□ 0.26
PKD1-220ENST00000487932 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 EVI5O60447 810 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 YWHAHQ04917 246 aaPredicted RBP16.69■□□□□ 0.26
PKD1-220ENST00000487932 PHLDB3Q6NSJ2 640 aa16.69■□□□□ 0.26
PKD1-220ENST00000487932 GNGT1P63211 74 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 LARSQ9P2J5 1176 aaKnown RBP16.68■□□□□ 0.26
PKD1-220ENST00000487932 MEIS1O00470 390 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 SRGAP2CP0DJJ0 459 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 ARHGAP25P42331 645 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 CHRNDQ07001 517 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 PPP2R5BQ15173 497 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 KCTD6Q8NC69 237 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 FLAD1Q8NFF5 587 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 SLC7A3Q8WY07 619 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 NACC1Q96RE7 527 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 TRPM2O94759 1503 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 DARS2Q6PI48 645 aaKnown RBP16.68■□□□□ 0.26
PKD1-220ENST00000487932 SIX6OS1Q8N1H7 587 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 PRPF38AQ8NAV1 312 aaKnown RBP16.68■□□□□ 0.26
PKD1-220ENST00000487932 TSR3Q9UJK0 312 aaKnown RBP16.68■□□□□ 0.26
PKD1-220ENST00000487932 CLIC2O15247 247 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 PMLP29590 882 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 SNAP25P60880 206 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 ANO4Q32M45 955 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 OR6B2Q6IFH4 312 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 NR1H4Q96RI1 486 aaPredicted RBP16.68■□□□□ 0.26
PKD1-220ENST00000487932 FAM49AQ9H0Q0 323 aaPredicted RBP16.68■□□□□ 0.26
PKD1-220ENST00000487932 RIPOR2Q9Y4F9 1068 aa16.68■□□□□ 0.26
PKD1-220ENST00000487932 NKX1-1Q15270 411 aaPredicted RBP16.67■□□□□ 0.26
PKD1-220ENST00000487932 ARHGEF18Q6ZSZ5 1173 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 ATP8B3O60423 1300 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 LRRN2O75325 713 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 SEC24BO95487 1268 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 HEXIM2Q96MH2 286 aaKnown RBP16.67■□□□□ 0.26
PKD1-220ENST00000487932 XPO4Q9C0E2 1151 aaKnown RBP16.67■□□□□ 0.26
PKD1-220ENST00000487932 Q9H521 79 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 C8orf34Q49A92 452 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 PDCD6IPQ8WUM4 868 aaKnown RBP16.67■□□□□ 0.26
PKD1-220ENST00000487932 CEP170P1Q96L14 293 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 CLIC6Q96NY7 704 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 NT5C1BQ96P26 610 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 RASSF7Q02833 373 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 SPOPLQ6IQ16 392 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 FASTKD5Q7L8L6 764 aaKnown RBP16.67■□□□□ 0.26
PKD1-220ENST00000487932 ANKRD13CQ8N6S4 541 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 BLVRAP53004 296 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 ELMSAN1Q6PJG2 1045 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 TRIM58Q8NG06 486 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 CACTINQ8WUQ7 758 aaKnown RBP16.67■□□□□ 0.26
PKD1-220ENST00000487932 IMPACTQ9P2X3 320 aa16.67■□□□□ 0.26
PKD1-220ENST00000487932 NEMP1O14524 444 aa16.66■□□□□ 0.26
PKD1-220ENST00000487932 DPYSL4O14531 572 aa16.66■□□□□ 0.26
PKD1-220ENST00000487932 PFKFB1P16118 471 aa16.66■□□□□ 0.26
PKD1-220ENST00000487932 MAPK4P31152 587 aa16.66■□□□□ 0.26
PKD1-220ENST00000487932 ARL4AP40617 200 aa16.66■□□□□ 0.26
PKD1-220ENST00000487932 KCNQ4P56696 695 aa16.66■□□□□ 0.26
PKD1-220ENST00000487932 NFX1Q12986 1120 aaKnown RBP16.66■□□□□ 0.26
PKD1-220ENST00000487932 EXOC3L4Q17RC7 722 aa16.66■□□□□ 0.26
PKD1-220ENST00000487932 HS1BP3Q53T59 392 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms