RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 PALMO75781 387 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 TFRCP02786 760 aaKnown RBP16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 TSPY3P0CV98 308 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 TSPY8P0CW00 308 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 NONOQ15233 471 aaKnown RBP eCLIP16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 PREPLQ4J6C6 727 aaPredicted RBP16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 PHLDB3Q6NSJ2 640 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 KRT25Q7Z3Z0 450 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ATP6V0A4Q9HBG4 840 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 TXLNGQ9NUQ3 528 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ZNF76P36508 570 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 KRT26Q7Z3Y9 468 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SPATA5Q8NB90 893 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 LPIN2Q92539 896 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 FAM167BQ9BTA0 163 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 NOD2Q9HC29 1040 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 PTPRMP28827 1452 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ARAP3Q8WWN8 1544 aa16.74■□□□□ 0.27
HLA-DQB1-209ENST00000487676 CIB2O75838 187 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SERPING1P05155 500 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SKOR1P84550 965 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 TTLL7Q6ZT98 887 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 MIPOL1Q8TD10 442 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ZSCAN10Q96SZ4 725 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 UBXN6Q9BZV1 441 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ATG3Q9NT62 314 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ASIC3Q9UHC3 531 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 IRS4O14654 1257 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 RWDD2BP57060 319 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 C6orf118Q5T5N4 469 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ARL6IP4Q66PJ3 421 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 CCDC174Q6PII3 467 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SLC30A9Q6PML9 568 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 MYOCDQ8IZQ8 938 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 DMGDHQ9UI17 866 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ATP6V0A2Q9Y487 856 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 CARSP49589 748 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 DPYDQ12882 1025 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 MAP7Q14244 749 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ERMNQ8TAM6 284 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 NSMCE1Q8WV22 266 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 EHD4Q9H223 541 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 BZW2Q9Y6E2 419 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 PLEKHG1Q9ULL1 1385 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 DIAPH2O60879 1101 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 MEX3CQ5U5Q3 659 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 EP400NLQ6ZTU2 488 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 CEP128Q6ZU80 1094 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 TBC1D10CQ8IV04 446 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 HDAC9Q9UKV0 1011 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 IKBKGQ9Y6K9 419 aa16.73■□□□□ 0.27
HLA-DQB1-209ENST00000487676 LMTK2Q8IWU2 1503 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 PLTPP55058 493 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ITIH3Q06033 890 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 YTHDF3Q7Z739 585 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SPOPO43791 374 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SLC8A3P57103 927 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SESN3P58005 492 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 OXER1Q8TDS5 423 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 U2AF1L4Q8WU68 220 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ZMYND12Q9H0C1 365 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 FRMPD1Q5SYB0 1578 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 CPDO75976 1380 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 CAMSAP1Q5T5Y3 1602 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ERBB3P21860 1342 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 EVI5O60447 810 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SKIP12755 728 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 CCDC152Q4G0S7 254 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 USP49Q70CQ1 688 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 AP1M1Q9BXS5 423 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 DISC1Q9NRI5 854 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 RBM12Q9NTZ6 932 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 INTS13Q9NVM9 706 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
HLA-DQB1-209ENST00000487676 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 EPB41P11171 864 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 PAX7P23759 505 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 ADCY2Q08462 1091 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 PHLDB2Q86SQ0 1253 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 TMEM139Q8IV31 216 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 IRAK4Q9NWZ3 460 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 VWDEQ8N2E2 1590 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 HHATQ5VTY9 493 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 CCDC62Q6P9F0 684 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SPATA24Q86W54 205 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 IQCGQ9H095 443 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SH2D4AQ9H788 454 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 LY9Q9HBG7 655 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 BACH1O14867 736 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 DDR1Q08345 913 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 HERC4Q5GLZ8 1057 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 C10orf76Q5T2E6 689 aa16.71■□□□□ 0.27
HLA-DQB1-209ENST00000487676 MLH3Q9UHC1 1453 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms