RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 PCDHA12Q9UN75 941 aa22.93■■□□□ 1.26
PHF1-209ENST00000487667 MYH7BA7E2Y1 1941 aa22.93■■□□□ 1.26
PHF1-209ENST00000487667 INPP5BP32019 993 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 BACE1P56817 501 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 ZNF280CQ8ND82 737 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 ZC3H4Q9UPT8 1303 aaKnown RBP22.92■■□□□ 1.26
PHF1-209ENST00000487667 CDC25AP30304 524 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 DHX8Q14562 1220 aaKnown RBP22.92■■□□□ 1.26
PHF1-209ENST00000487667 KCNB1Q14721 858 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 NCAPHQ15003 741 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 CCDC174Q6PII3 467 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 MCF2L2Q86YR7 1114 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 KLRG1Q96E93 195 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 C12orf42Q96LP6 360 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 FAM20AQ96MK3 541 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 KCNMB3Q9NPA1 279 aa22.92■■□□□ 1.26
PHF1-209ENST00000487667 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.92■■□□□ 1.26
PHF1-209ENST00000487667 KDM3AQ9Y4C1 1321 aa22.91■■□□□ 1.26
PHF1-209ENST00000487667 PTPRAP18433 802 aa22.91■■□□□ 1.26
PHF1-209ENST00000487667 BMP6P22004 513 aa22.91■■□□□ 1.26
PHF1-209ENST00000487667 HIRAP54198 1017 aaPredicted RBP22.91■■□□□ 1.26
PHF1-209ENST00000487667 NAALADL2Q58DX5 795 aa22.91■■□□□ 1.26
PHF1-209ENST00000487667 LDHDQ86WU2 507 aa22.91■■□□□ 1.26
PHF1-209ENST00000487667 DRC7Q8IY82 874 aa22.91■■□□□ 1.26
PHF1-209ENST00000487667 DCPSQ96C86 337 aaKnown RBP22.91■■□□□ 1.26
PHF1-209ENST00000487667 NT5C3AQ9H0P0 336 aa22.91■■□□□ 1.26
PHF1-209ENST00000487667 CTDP1Q9Y5B0 961 aaPredicted RBP22.91■■□□□ 1.26
PHF1-209ENST00000487667 PP2D1A8MPX8 630 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 OPLAHO14841 1288 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 CBFA2T2O43439 604 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 PLCG1P19174 1290 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 ZKSCAN5Q9Y2L8 839 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 MTMR2Q13614 643 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 HAS1Q92839 578 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 TANGO6Q9C0B7 1094 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 PPP1R9AQ9ULJ8 1098 aa22.9■■□□□ 1.26
PHF1-209ENST00000487667 ZBED4O75132 1171 aa22.89■■□□□ 1.25
PHF1-209ENST00000487667 RPN1P04843 607 aaKnown RBP22.89■■□□□ 1.25
PHF1-209ENST00000487667 VCAM1P19320 739 aa22.89■■□□□ 1.25
PHF1-209ENST00000487667 PPP1R2P41236 205 aa22.89■■□□□ 1.25
PHF1-209ENST00000487667 SPP2Q13103 211 aa22.89■■□□□ 1.25
PHF1-209ENST00000487667 CCDC84Q86UT8 332 aaPredicted RBP22.89■■□□□ 1.25
PHF1-209ENST00000487667 SULF1Q8IWU6 871 aa22.89■■□□□ 1.25
PHF1-209ENST00000487667 SLC38A10Q9HBR0 1119 aa22.89■■□□□ 1.25
PHF1-209ENST00000487667 CCPG1Q9ULG6 757 aa22.89■■□□□ 1.25
PHF1-209ENST00000487667 CFBP00751 764 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 GHRHRQ02643 423 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 CUL4BQ13620 913 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 ZNF658Q5TYW1 1059 aaPredicted RBP22.88■■□□□ 1.25
PHF1-209ENST00000487667 KCTD17Q8N5Z5 321 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 MMTAG2Q9BU76 263 aaKnown RBP22.88■■□□□ 1.25
PHF1-209ENST00000487667 EMILIN3Q9NT22 766 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 FBXO28Q9NVF7 368 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 GLTPD2A6NH11 291 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 ZNF500O60304 480 aaPredicted RBP22.88■■□□□ 1.25
PHF1-209ENST00000487667 ZNF76P36508 570 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 SV2BQ7L1I2 683 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 ERMNQ8TAM6 284 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 RBM46Q8TBY0 533 aaKnown RBP22.88■■□□□ 1.25
PHF1-209ENST00000487667 SNX29Q8TEQ0 813 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 MTRQ99707 1265 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 C7orf25Q9BPX7 421 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 MAF1Q9H063 256 aa22.88■■□□□ 1.25
PHF1-209ENST00000487667 FLOT1O75955 427 aa22.87■■□□□ 1.25
PHF1-209ENST00000487667 HYIQ5T013 277 aa22.87■■□□□ 1.25
PHF1-209ENST00000487667 HAUS3Q68CZ6 603 aa22.87■■□□□ 1.25
PHF1-209ENST00000487667 ZC3H15Q8WU90 426 aaKnown RBP22.87■■□□□ 1.25
PHF1-209ENST00000487667 L3MBTL3Q96JM7 780 aaPredicted RBP22.87■■□□□ 1.25
PHF1-209ENST00000487667 PPP1R12BO60237 982 aaPredicted RBP22.86■■□□□ 1.25
PHF1-209ENST00000487667 STIM1Q13586 685 aa22.86■■□□□ 1.25
PHF1-209ENST00000487667 USP50Q70EL3 339 aaPredicted RBP22.86■■□□□ 1.25
PHF1-209ENST00000487667 RPAP3Q9H6T3 665 aaPredicted RBP22.86■■□□□ 1.25
PHF1-209ENST00000487667 HOXA13P31271 388 aaPredicted RBP22.86■■□□□ 1.25
PHF1-209ENST00000487667 HSD17B4P51659 736 aa22.86■■□□□ 1.25
PHF1-209ENST00000487667 OAZ1P54368 228 aa22.86■■□□□ 1.25
PHF1-209ENST00000487667 PRR16Q569H4 304 aa22.86■■□□□ 1.25
PHF1-209ENST00000487667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.86■■□□□ 1.251e-7■■■□□ 17.9
PHF1-209ENST00000487667 ETNPPLQ8TBG4 499 aa22.86■■□□□ 1.25
PHF1-209ENST00000487667 ZKSCAN4Q969J2 545 aaPredicted RBP22.86■■□□□ 1.25
PHF1-209ENST00000487667 BLZF1Q9H2G9 400 aa22.86■■□□□ 1.25
PHF1-209ENST00000487667 TMOD4Q9NZQ9 345 aa22.86■■□□□ 1.25
PHF1-209ENST00000487667 ZHX2Q9Y6X8 837 aa22.86■■□□□ 1.25
PHF1-209ENST00000487667 RHOBTB3O94955 611 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 GRB10Q13322 594 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 TMEM119Q4V9L6 283 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 SPATA1Q5VX52 437 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 CNNM4Q6P4Q7 775 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 FCHSD1Q86WN1 690 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 LARP4BQ92615 738 aaKnown RBP22.85■■□□□ 1.25
PHF1-209ENST00000487667 STAMQ92783 540 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 IMPACTQ9P2X3 320 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 ZNF536O15090 1300 aa22.85■■□□□ 1.25
PHF1-209ENST00000487667 POTEMA6NI47 508 aa22.84■■□□□ 1.25
PHF1-209ENST00000487667 SETQ01105 290 aaPredicted RBP22.84■■□□□ 1.25
PHF1-209ENST00000487667 MYPNQ86TC9 1320 aa22.84■■□□□ 1.25
PHF1-209ENST00000487667 MAP3K9P80192 1104 aa22.84■■□□□ 1.25
PHF1-209ENST00000487667 FANCCQ00597 558 aa22.84■■□□□ 1.25
PHF1-209ENST00000487667 SPC24Q8NBT2 197 aa22.84■■□□□ 1.25
PHF1-209ENST00000487667 P2RX7Q99572 595 aaKnown RBP22.84■■□□□ 1.25
PHF1-209ENST00000487667 TRIM9Q9C026 710 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms