RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ALAS1P13196 640 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 KRT81Q14533 505 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 PANX2Q96RD6 677 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
EPHB4-206ENST00000487222 ZWINTO95229 277 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 BFSP1Q12934 665 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 ARHGEF16Q5VV41 709 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 GRAMD1CQ8IYS0 662 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 MAGOHBQ96A72 148 aaKnown RBP16.05■□□□□ 0.16
EPHB4-206ENST00000487222 ZNF148Q9UQR1 794 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 ECM2O94769 699 aaPredicted RBP16.05■□□□□ 0.16
EPHB4-206ENST00000487222 INTS9Q9NV88 658 aaKnown RBP16.05■□□□□ 0.16
EPHB4-206ENST00000487222 DLATP10515 647 aaKnown RBP16.05■□□□□ 0.16
EPHB4-206ENST00000487222 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
EPHB4-206ENST00000487222 PARD6BQ9BYG5 372 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 EPB41L5Q9HCM4 733 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 KIF1BO60333 1816 aa16.05■□□□□ 0.16
EPHB4-206ENST00000487222 SUN1O94901 812 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 TNNC2P02585 160 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 CCNE1P24864 410 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 MYL7Q01449 175 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 FAN1Q9Y2M0 1017 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 JRKLQ9Y4A0 524 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 DAAM1Q9Y4D1 1078 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 hCG_1984214I3L0E3 225 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 MYO1FO00160 1098 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 GAP43P17677 238 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 YARSP54577 528 aaKnown RBP16.04■□□□□ 0.16
EPHB4-206ENST00000487222 LMNB2Q03252 620 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 PTK2Q05397 1052 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 DMP1Q13316 513 aaPredicted RBP16.04■□□□□ 0.16
EPHB4-206ENST00000487222 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 ZNF713Q8N859 430 aaPredicted RBP16.04■□□□□ 0.16
EPHB4-206ENST00000487222 ACRBPQ8NEB7 543 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 RASGRP4Q8TDF6 673 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 PUS7LQ9H0K6 701 aaKnown RBP16.04■□□□□ 0.16
EPHB4-206ENST00000487222 HAUS2Q9NVX0 235 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 USH1CQ9Y6N9 552 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 PLA2R1Q13018 1463 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 TMEM232C9JQI7 657 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 PGRMC1O00264 195 aaKnown RBP16.04■□□□□ 0.16
EPHB4-206ENST00000487222 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
EPHB4-206ENST00000487222 SASH1O94885 1247 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
EPHB4-206ENST00000487222 MFAP3P55082 362 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 EXOC4Q96A65 974 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 SOWAHDA6NJG2 315 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 SARM1Q6SZW1 724 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 KIAA0825Q8IV33 1275 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 CCDC197Q8NCU1 140 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 THAP9Q9H5L6 903 aa16.04■□□□□ 0.16
EPHB4-206ENST00000487222 HECW2Q9P2P5 1572 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 CLTAP09496 248 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
EPHB4-206ENST00000487222 BAG6P46379 1132 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 CLCN6P51797 869 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 PABPC4Q13310 644 aaKnown RBP eCLIP16.03■□□□□ 0.162e-9■■■■■ 36
EPHB4-206ENST00000487222 MESDQ14696 234 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 THRAP3Q9Y2W1 955 aaKnown RBP16.03■□□□□ 0.16
EPHB4-206ENST00000487222 XDHP47989 1333 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 ARHGAP42A6NI28 874 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 MAP7Q14244 749 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 PTPN21Q16825 1174 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 LRRC8CQ8TDW0 803 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 RNF8O76064 485 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 SCYL2Q6P3W7 929 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 AS3MTQ9HBK9 375 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 ZSWIM5Q9P217 1185 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 RRP15Q9Y3B9 282 aaKnown RBP16.03■□□□□ 0.16
EPHB4-206ENST00000487222 TTLL3Q9Y4R7 772 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 NDUFA10O95299 355 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 CEP120Q8N960 986 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 GBP5Q96PP8 586 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
EPHB4-206ENST00000487222 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
EPHB4-206ENST00000487222 CPSF1Q10570 1443 aaKnown RBP16.03■□□□□ 0.16
EPHB4-206ENST00000487222 CAPN12Q6ZSI9 719 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 CNKSR1Q969H4 720 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 ZMYND10O75800 440 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 SCNN1DP51172 638 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 IL9RQ01113 521 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 TTC19Q6DKK2 380 aaPredicted RBP16.02■□□□□ 0.16
EPHB4-206ENST00000487222 TBCKQ8TEA7 893 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 MLXIPQ9HAP2 919 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 SHROOM2Q13796 1616 aa16.02■□□□□ 0.16
EPHB4-206ENST00000487222 SNCBQ16143 134 aa16.02■□□□□ 0.15
EPHB4-206ENST00000487222 TRIM50Q86XT4 487 aa16.02■□□□□ 0.15
EPHB4-206ENST00000487222 FAM186BQ8IYM0 893 aa16.02■□□□□ 0.15
EPHB4-206ENST00000487222 LRCH2Q5VUJ6 765 aa16.02■□□□□ 0.15
EPHB4-206ENST00000487222 NLRP10Q86W26 655 aa16.02■□□□□ 0.15
EPHB4-206ENST00000487222 EFCAB13Q8IY85 973 aa16.02■□□□□ 0.15
EPHB4-206ENST00000487222 TRIM11Q96F44 468 aa16.02■□□□□ 0.15
EPHB4-206ENST00000487222 ERVV-1B6SEH8 477 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 HSPA6P17066 643 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms