RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MAD2L2Q9UI95 211 aa28.62■■■□□ 2.17
LIME1-206ENST00000487026 MRPL11Q9Y3B7 192 aaKnown RBP28.62■■■□□ 2.17
LIME1-206ENST00000487026 U3KPZ7 1027 aaPredicted RBP28.62■■■□□ 2.17
LIME1-206ENST00000487026 SEPT14Q6ZU15 432 aa28.61■■■□□ 2.17
LIME1-206ENST00000487026 MCF2L2Q86YR7 1114 aa28.61■■■□□ 2.17
LIME1-206ENST00000487026 MYLIPQ8WY64 445 aa28.61■■■□□ 2.17
LIME1-206ENST00000487026 MTG1Q9BT17 334 aaPredicted RBP28.61■■■□□ 2.17
LIME1-206ENST00000487026 NOC4LQ9BVI4 516 aaKnown RBP28.61■■■□□ 2.17
LIME1-206ENST00000487026 SENP2Q9HC62 589 aa28.61■■■□□ 2.17
LIME1-206ENST00000487026 IL23AQ9NPF7 189 aa28.61■■■□□ 2.17
LIME1-206ENST00000487026 GPHNQ9NQX3 736 aaPredicted RBP28.61■■■□□ 2.17
LIME1-206ENST00000487026 TRMT13Q9NUP7 481 aaKnown RBP28.61■■■□□ 2.17
LIME1-206ENST00000487026 GRXCR1A8MXD5 290 aa28.6■■■□□ 2.17
LIME1-206ENST00000487026 NKRFO15226 690 aaKnown RBP eCLIP28.6■■■□□ 2.171e-7■■■□□ 16.1
LIME1-206ENST00000487026 SGSM2O43147 1006 aa28.6■■■□□ 2.17
LIME1-206ENST00000487026 TTLL4Q14679 1199 aa28.6■■■□□ 2.17
LIME1-206ENST00000487026 CHST3Q7LGC8 479 aa28.6■■■□□ 2.17
LIME1-206ENST00000487026 NSUN6Q8TEA1 469 aaKnown RBP28.6■■■□□ 2.17
LIME1-206ENST00000487026 RMDN3Q96TC7 470 aa28.6■■■□□ 2.17
LIME1-206ENST00000487026 E7EWF7 191 aa28.59■■■□□ 2.17
LIME1-206ENST00000487026 DLL1O00548 723 aa28.59■■■□□ 2.17
LIME1-206ENST00000487026 IFIT3O14879 490 aaKnown RBP28.59■■■□□ 2.17
LIME1-206ENST00000487026 CFBP00751 764 aa28.59■■■□□ 2.17
LIME1-206ENST00000487026 NBPF20Q3BBV1 942 aa28.59■■■□□ 2.17
LIME1-206ENST00000487026 BRDTQ58F21 947 aaPredicted RBP28.59■■■□□ 2.17
LIME1-206ENST00000487026 PSRC1Q6PGN9 363 aaPredicted RBP28.59■■■□□ 2.17
LIME1-206ENST00000487026 AMNQ9BXJ7 453 aa28.59■■■□□ 2.17
LIME1-206ENST00000487026 CDH23Q9H251 3354 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 PALM3A6NDB9 673 aaPredicted RBP28.58■■■□□ 2.17
LIME1-206ENST00000487026 A6NJR5 290 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 PPP1R11O60927 126 aaPredicted RBP28.58■■■□□ 2.17
LIME1-206ENST00000487026 CYP2C9P11712 490 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 DNAJB2P25686 324 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 LY6KQ17RY6 165 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 RASIP1Q5U651 963 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 CCDC62Q6P9F0 684 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 STOX1Q6ZVD7 989 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 MAF1Q9H063 256 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 WNT8AQ9H1J5 351 aa28.58■■■□□ 2.17
LIME1-206ENST00000487026 MYH6P13533 1939 aa28.57■■■□□ 2.16
LIME1-206ENST00000487026 OPLAHO14841 1288 aa28.57■■■□□ 2.16
LIME1-206ENST00000487026 EIF2AK2P19525 551 aaKnown RBP28.57■■■□□ 2.16
LIME1-206ENST00000487026 STXBP2Q15833 593 aa28.57■■■□□ 2.16
LIME1-206ENST00000487026 SLC35G1Q2M3R5 365 aa28.57■■■□□ 2.16
LIME1-206ENST00000487026 FAM47CQ5HY64 1035 aa28.57■■■□□ 2.16
LIME1-206ENST00000487026 ARHGEF16Q5VV41 709 aa28.57■■■□□ 2.16
LIME1-206ENST00000487026 MTMR8Q96EF0 704 aa28.57■■■□□ 2.16
LIME1-206ENST00000487026 SCLYQ96I15 445 aa28.57■■■□□ 2.16
LIME1-206ENST00000487026 CXXC1Q9P0U4 656 aaPredicted RBP28.57■■■□□ 2.16
LIME1-206ENST00000487026 FGBP02675 491 aa28.56■■■□□ 2.16
LIME1-206ENST00000487026 PBX2P40425 430 aa28.56■■■□□ 2.16
LIME1-206ENST00000487026 CHMP4BP1P59074 171 aa28.56■■■□□ 2.16
LIME1-206ENST00000487026 RALYLQ86SE5 291 aaKnown RBP28.56■■■□□ 2.16
LIME1-206ENST00000487026 IWS1Q96ST2 819 aa28.56■■■□□ 2.16
LIME1-206ENST00000487026 PCDHA1Q9Y5I3 950 aa28.56■■■□□ 2.16
LIME1-206ENST00000487026 ZBTB5O15062 677 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 GRM4Q14833 912 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 GRIN2CQ14957 1233 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 OTOP2Q7RTS6 562 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 HOMER1Q86YM7 354 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 NCOA7Q8NI08 942 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 AFG1LQ8WV93 481 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 HERVK_113Q902F9 699 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 PIGSQ96S52 555 aa28.55■■■□□ 2.16
LIME1-206ENST00000487026 TMEM265A0A087WTH1 108 aa28.54■■■□□ 2.16
LIME1-206ENST00000487026 ERICH2A1L162 156 aa28.54■■■□□ 2.16
LIME1-206ENST00000487026 KPNA6O60684 536 aa28.54■■■□□ 2.16
LIME1-206ENST00000487026 WTAPQ15007 396 aa28.54■■■□□ 2.16
LIME1-206ENST00000487026 MAP4K1Q92918 833 aa28.54■■■□□ 2.16
LIME1-206ENST00000487026 TIFAQ96CG3 184 aa28.54■■■□□ 2.16
LIME1-206ENST00000487026 PBX4Q9BYU1 374 aa28.54■■■□□ 2.16
LIME1-206ENST00000487026 PXMP2Q9NR77 195 aa28.54■■■□□ 2.16
LIME1-206ENST00000487026 UNC80Q8N2C7 3258 aa28.53■■■□□ 2.16
LIME1-206ENST00000487026 NR3C2P08235 984 aa28.53■■■□□ 2.16
LIME1-206ENST00000487026 SUPT20HL2P0C7V6 817 aa28.53■■■□□ 2.16
LIME1-206ENST00000487026 HOXA13P31271 388 aaPredicted RBP28.53■■■□□ 2.16
LIME1-206ENST00000487026 HSD17B4P51659 736 aa28.53■■■□□ 2.16
LIME1-206ENST00000487026 ANTXR2P58335 489 aa28.53■■■□□ 2.16
LIME1-206ENST00000487026 ARHGAP1Q07960 439 aa28.53■■■□□ 2.16
LIME1-206ENST00000487026 MAFAQ8NHW3 353 aaPredicted RBP28.53■■■□□ 2.16
LIME1-206ENST00000487026 GH1P01241 217 aa28.52■■■□□ 2.16
LIME1-206ENST00000487026 FOSL2P15408 326 aa28.52■■■□□ 2.16
LIME1-206ENST00000487026 TMEM67Q5HYA8 995 aa28.52■■■□□ 2.16
LIME1-206ENST00000487026 VWCEQ96DN2 955 aa28.52■■■□□ 2.16
LIME1-206ENST00000487026 ZNF576Q9H609 170 aa28.52■■■□□ 2.16
LIME1-206ENST00000487026 RIOX1Q9H6W3 641 aa28.52■■■□□ 2.16
LIME1-206ENST00000487026 RBM8AQ9Y5S9 174 aaKnown RBP28.52■■■□□ 2.16
LIME1-206ENST00000487026 EYSQ5T1H1 3165 aa28.52■■■□□ 2.16
LIME1-206ENST00000487026 CYTH3O43739 400 aa28.51■■■□□ 2.15
LIME1-206ENST00000487026 EIF3JO75822 258 aaKnown RBP28.51■■■□□ 2.15
LIME1-206ENST00000487026 MYCLP12524 364 aaPredicted RBP28.51■■■□□ 2.15
LIME1-206ENST00000487026 TROAPQ12815 778 aa28.51■■■□□ 2.15
LIME1-206ENST00000487026 NFRKBQ6P4R8 1299 aa28.51■■■□□ 2.15
LIME1-206ENST00000487026 DDX41Q9UJV9 622 aaKnown RBP28.51■■■□□ 2.15
LIME1-206ENST00000487026 SCN10AQ9Y5Y9 1956 aa28.51■■■□□ 2.15
LIME1-206ENST00000487026 BAZ2BQ9UIF8 2168 aaKnown RBP28.51■■■□□ 2.15
LIME1-206ENST00000487026 MMP3P08254 477 aa28.5■■■□□ 2.15
LIME1-206ENST00000487026 SART3Q15020 963 aaKnown RBP28.5■■■□□ 2.15
LIME1-206ENST00000487026 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.5■■■□□ 2.15
LIME1-206ENST00000487026 MB21D2Q8IYB1 491 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms