RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 USP54Q70EL1 1684 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 ATP6V1AP38606 617 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 CCDC152Q4G0S7 254 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 GIMAP8Q8ND71 665 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 ZNF512BQ96KM6 892 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 TLR10Q9BXR5 811 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 NDST4Q9H3R1 872 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 SH2D4AQ9H788 454 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 VIPAS39Q9H9C1 493 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 RBM28Q9NW13 759 aaKnown RBP13.72□□□□□ -0.21
HSPG2-211ENST00000486901 TJP1Q07157 1748 aa13.72□□□□□ -0.21
HSPG2-211ENST00000486901 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 PNPLA7Q6ZV29 1317 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 ZNF233A6NK53 670 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 LONP1P36776 959 aaKnown RBP13.71□□□□□ -0.21
HSPG2-211ENST00000486901 POLR2FP61218 127 aaKnown RBP13.71□□□□□ -0.21
HSPG2-211ENST00000486901 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 EHBP1Q8NDI1 1231 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 TRIM58Q8NG06 486 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 MCM3P25205 808 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 NBPF9Q3BBW0 867 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 TBC1D5Q92609 795 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 TTYH3Q9C0H2 523 aa13.71□□□□□ -0.21
HSPG2-211ENST00000486901 FRMPD2Q68DX3 1309 aaPredicted RBP13.71□□□□□ -0.22
HSPG2-211ENST00000486901 CCNE1P24864 410 aa13.71□□□□□ -0.22
HSPG2-211ENST00000486901 CAVIN4Q5BKX8 364 aa13.71□□□□□ -0.22
HSPG2-211ENST00000486901 RCSD1Q6JBY9 416 aa13.71□□□□□ -0.22
HSPG2-211ENST00000486901 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.22
HSPG2-211ENST00000486901 ALS2CR12Q96Q35 445 aa13.71□□□□□ -0.22
HSPG2-211ENST00000486901 IL17RBQ9NRM6 502 aa13.71□□□□□ -0.22
HSPG2-211ENST00000486901 SLAIN2Q9P270 581 aa13.71□□□□□ -0.22
HSPG2-211ENST00000486901 PCDHA4Q9UN74 947 aa13.71□□□□□ -0.22
HSPG2-211ENST00000486901 MARCH6O60337 910 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 COPB2P35606 906 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 E2F5Q15329 346 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 ERFEQ4G0M1 354 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 FGFBP2Q9BYJ0 223 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 THAP9Q9H5L6 903 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 LRRC4CQ9HCJ2 640 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 BCS1LQ9Y276 419 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 ATRNO75882 1429 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 NPHP3-ACAD11A0A0J9YXS1 232 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 TRAF5O00463 557 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 SLURP2P0DP57 97 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 KLRC1P26715 233 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 FAM133AQ8N9E0 248 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 COA7Q96BR5 231 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 CDK5RAP3Q96JB5 506 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 MEA1Q16626 185 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 SPRED3Q2MJR0 410 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 MCTP2Q6DN12 878 aa13.7□□□□□ -0.22
HSPG2-211ENST00000486901 FAM84BQ96KN1 310 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-211ENST00000486901 MYMKA6NI61 221 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 KCNK3O14649 394 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 OPA1O60313 960 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 TUBBP07437 444 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 ACTN1P12814 892 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 SPTY2D1Q68D10 685 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-211ENST00000486901 IQCEQ6IPM2 695 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 KCNK18Q7Z418 384 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 TGFBRAP1Q8WUH2 860 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 CASKIN2Q8WXE0 1202 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 SCLT1Q96NL6 688 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 A0A1W2PQC6 194 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 TARSL2A2RTX5 802 aaKnown RBP13.69□□□□□ -0.22
HSPG2-211ENST00000486901 RHOBTB3O94955 611 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 LSP1P33241 339 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 KLHDC7AQ5VTJ3 777 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 TICAM2Q86XR7 235 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 TBCKQ8TEA7 893 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 DPH5Q9H2P9 285 aa13.69□□□□□ -0.22
HSPG2-211ENST00000486901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.222e-6■■■■■ 86.2
HSPG2-211ENST00000486901 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 DCDC2CA8MYV0 355 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 TDP2O95551 362 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 GRIK5Q16478 980 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 UBLCP1Q8WVY7 318 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-211ENST00000486901 KBTBD4Q9NVX7 518 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 PLAAQ9Y263 795 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 PKD1L3Q7Z443 1732 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 CEP104O60308 925 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 NR1D1P20393 614 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 EPHB4P54760 987 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
HSPG2-211ENST00000486901 DZIP1Q86YF9 867 aaKnown RBP13.68□□□□□ -0.22
HSPG2-211ENST00000486901 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
HSPG2-211ENST00000486901 CCDC47Q96A33 483 aaKnown RBP13.68□□□□□ -0.22
HSPG2-211ENST00000486901 LSM14BQ9BX40 385 aaKnown RBP13.68□□□□□ -0.22
HSPG2-211ENST00000486901 DDX47Q9H0S4 455 aaKnown RBP13.68□□□□□ -0.22
HSPG2-211ENST00000486901 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-211ENST00000486901 GGT7Q9UJ14 662 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms