RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 HSD17B4P51659 736 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 KARSQ15046 597 aaKnown RBP13.1□□□□□ -0.31
PRKCB-207ENST00000486868 USH1GQ495M9 461 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 ZSCAN30Q86W11 494 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 CCDC47Q96A33 483 aaKnown RBP13.1□□□□□ -0.31
PRKCB-207ENST00000486868 DCPSQ96C86 337 aaKnown RBP13.1□□□□□ -0.31
PRKCB-207ENST00000486868 MTRQ99707 1265 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 C7orf25Q9BPX7 421 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
PRKCB-207ENST00000486868 TRIM5Q9C035 493 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 NT5C3AQ9H0P0 336 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 TTC12Q9H892 705 aaPredicted RBP13.1□□□□□ -0.31
PRKCB-207ENST00000486868 PCDHA12Q9UN75 941 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 ADAMTS5Q9UNA0 930 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 KDM3AQ9Y4C1 1321 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 ATP2A1O14983 1001 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 GRIN3BO60391 1043 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 ZBED4O75132 1171 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 VCAM1P19320 739 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 AFMP43652 599 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 MAP3K9P80192 1104 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 SPP2Q13103 211 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 COBLL1Q53SF7 1204 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 ZNF658Q5TYW1 1059 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-207ENST00000486868 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 ZNF536O15090 1300 aa13.09□□□□□ -0.31
PRKCB-207ENST00000486868 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 ESPNB1AK53 854 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 CBFA2T2O43439 604 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 PPP1R12BO60237 982 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-207ENST00000486868 MARCH6O60337 910 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-207ENST00000486868 RHOBTB3O94955 611 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 PLCG1P19174 1290 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 MUTP22033 750 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 SNAP25P60880 206 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 MTMR2Q13614 643 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 ZYXQ15942 572 aaKnown RBP13.08□□□□□ -0.32
PRKCB-207ENST00000486868 TKFCQ3LXA3 575 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 NIPA1Q7RTP0 329 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 GRAMD1CQ8IYS0 662 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 RASSF8Q8NHQ8 419 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 LENG9Q96B70 501 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 P2RX7Q99572 595 aaKnown RBP13.08□□□□□ -0.32
PRKCB-207ENST00000486868 FBXO28Q9NVF7 368 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-207ENST00000486868 CCPG1Q9ULG6 757 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 AFG3L2Q9Y4W6 797 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 SBF1O95248 1867 aa13.08□□□□□ -0.32
PRKCB-207ENST00000486868 UNCXA6NJT0 531 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 PP2D1A8MPX8 630 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 RPN1P04843 607 aaKnown RBP13.07□□□□□ -0.32
PRKCB-207ENST00000486868 PTMAP06454 111 aaKnown RBP13.07□□□□□ -0.32
PRKCB-207ENST00000486868 BCRP11274 1271 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 CDC25AP30304 524 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 DSG3P32926 999 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 PLCB2Q00722 1185 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
PRKCB-207ENST00000486868 GRB10Q13322 594 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 CUL4BQ13620 913 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 HAUS3Q68CZ6 603 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 CCDC174Q6PII3 467 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 SV2BQ7L1I2 683 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 KRT26Q7Z3Y9 468 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 ERMNQ8TAM6 284 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
PRKCB-207ENST00000486868 TMOD4Q9NZQ9 345 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 IMPACTQ9P2X3 320 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 ZKSCAN5Q9Y2L8 839 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 ZHX2Q9Y6X8 837 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 FRMPD4Q14CM0 1322 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 RPTORQ8N122 1335 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 SSC5DA1L4H1 1573 aa13.07□□□□□ -0.32
PRKCB-207ENST00000486868 IGLV3-22A0A075B6J6 115 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 A0A087WWV3 80 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 IQCA1LA6NCM1 817 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 KLRC4O43908 158 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 FLOT1O75955 427 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 CFBP00751 764 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 ZNF18P17022 549 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 IREB2P48200 963 aaKnown RBP13.06□□□□□ -0.32
PRKCB-207ENST00000486868 COG2Q14746 738 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 SPATA1Q5VX52 437 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 XRRA1Q6P2D8 792 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 FOXR2Q6PJQ5 311 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 CATSPERGQ6ZRH7 1159 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 CCDC84Q86UT8 332 aaPredicted RBP13.06□□□□□ -0.32
PRKCB-207ENST00000486868 SNX29Q8TEQ0 813 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 RAD54LQ92698 747 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 ZKSCAN4Q969J2 545 aaPredicted RBP13.06□□□□□ -0.32
PRKCB-207ENST00000486868 PNMA5Q96PV4 448 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 TRIM9Q9C026 710 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 HSD3B7Q9H2F3 369 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms