RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SNX14Q9Y5W7 946 aa13.93□□□□□ -0.18
HLA-DOA-204ENST00000485901 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
HLA-DOA-204ENST00000485901 ZEB2O60315 1214 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 DDAH1O94760 285 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 CALM1P0DP23 149 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 CALM2P0DP24 149 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 CALM3P0DP25 149 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 KIF5BP33176 963 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 GNAQP50148 359 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 ARMCX2Q7L311 632 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 ZNF654Q8IZM8 581 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 FAM133AQ8N9E0 248 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 CTCFLQ8NI51 663 aaPredicted RBP13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 JAKMIP1Q96N16 626 aaKnown RBP13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 KATNBL1Q9H079 304 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 IL23AQ9NPF7 189 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 MSRAQ9UJ68 235 aa13.92□□□□□ -0.18
HLA-DOA-204ENST00000485901 TNFRSF10AO00220 468 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 FGD1P98174 961 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 COL9A3Q14050 684 aaPredicted RBP13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 CDC37Q16543 378 aaPredicted RBP13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 MUM1L1Q5H9M0 696 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 IQSEC1Q6DN90 963 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 BLOC1S2Q6QNY1 142 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 C16orf59Q7L2K0 433 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 RPUSD2Q8IZ73 545 aaKnown RBP13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 VTI1AQ96AJ9 217 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 FGD4Q96M96 766 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 LZTS2Q9BRK4 669 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 PBX4Q9BYU1 374 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 A1CFQ9NQ94 594 aaKnown RBP13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 BDP1A6H8Y1 2624 aa13.91□□□□□ -0.18
HLA-DOA-204ENST00000485901 CHD9Q3L8U1 2897 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 PFKMP08237 780 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 SMARCA1P28370 1054 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 TRAF1Q13077 416 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 FBXO11Q86XK2 927 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 CCDC144CPQ8IYA2 1237 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 TCEANC2Q96MN5 208 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 MYL10Q9BUA6 226 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 MAF1Q9H063 256 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 RIOX1Q9H6W3 641 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 CYP39A1Q9NYL5 469 aa13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
HLA-DOA-204ENST00000485901 MYADML2A6NDP7 307 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 ZBTB5O15062 677 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 CTAGE5O15320 804 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 FGBP02675 491 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 CSF2RAP15509 400 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 TNFAIP2Q03169 654 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 QRICH1Q2TAL8 776 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 USH1GQ495M9 461 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 NSMFQ6X4W1 530 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 FANCBQ8NB91 859 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 CLEC4DQ8WXI8 215 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 LENG1Q96BZ8 264 aaPredicted RBP13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 MTMR8Q96EF0 704 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 THEGQ9P2T0 379 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 MRPL11Q9Y3B7 192 aaKnown RBP13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 ABCB11O95342 1321 aa13.89□□□□□ -0.19
HLA-DOA-204ENST00000485901 CHD7Q9P2D1 2997 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 CASTP20810 708 aaKnown RBP13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 RPS6KB1P23443 525 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 CNTN2Q02246 1040 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 BAATQ14032 418 aaPredicted RBP13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 RNF207Q6ZRF8 634 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 Q6ZUG5 572 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 MCF2L2Q86YR7 1114 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 FBXL16Q8N461 479 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 MORC4Q8TE76 937 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 TM6SF1Q9BZW5 370 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 AP5M1Q9H0R1 490 aa13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 TSPYL2Q9H2G4 693 aaPredicted RBP13.88□□□□□ -0.19
HLA-DOA-204ENST00000485901 PNMA6FA0A0J9YX94 578 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 PTPDC1A2A3K4 754 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 NFIBO00712 420 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 ZBTB43O43298 467 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 ADCY6O43306 1168 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 CYTH3O43739 400 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 SUPT20HL2P0C7V6 817 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 CPA1P15085 419 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 POU3F3P20264 500 aaPredicted RBP13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 ITGA7Q13683 1181 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 RUFY3Q7L099 469 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 RRP36Q96EU6 259 aaKnown RBP13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 ASB2Q96Q27 587 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 PIGSQ96S52 555 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 SPZ1Q9BXG8 430 aa13.87□□□□□ -0.19
HLA-DOA-204ENST00000485901 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms