RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MOV10L1Q9BXT6 1211 aaKnown RBP12.91□□□□□ -0.34
SND1-212ENST00000485871 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
SND1-212ENST00000485871 SPATC1LQ9H0A9 340 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 R3HDMLQ9H3Y0 253 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 RNF186Q9NXI6 227 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 MGAMO43451 1857 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 GCOM1H8Y6P7 765 aaPredicted RBP12.9□□□□□ -0.34
SND1-212ENST00000485871 CFBP00751 764 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 FOSP01100 380 aaPredicted RBP12.9□□□□□ -0.34
SND1-212ENST00000485871 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 SREBF1P36956 1147 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 TM4SF4P48230 202 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 MRE11P49959 708 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 CEBPZQ03701 1054 aaKnown RBP12.9□□□□□ -0.34
SND1-212ENST00000485871 SLC39A14Q15043 492 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 SLC30A10Q6XR72 485 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 NEK8Q86SG6 692 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 C4orf32Q8N8J7 132 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 CHST13Q8NET6 341 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 SYAP1Q96A49 352 aaPredicted RBP12.9□□□□□ -0.34
SND1-212ENST00000485871 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.34
SND1-212ENST00000485871 NOL7Q9UMY1 257 aaKnown RBP12.9□□□□□ -0.34
SND1-212ENST00000485871 CTDP1Q9Y5B0 961 aaPredicted RBP12.9□□□□□ -0.34
SND1-212ENST00000485871 KIAA1217Q5T5P2 1943 aa12.9□□□□□ -0.35
SND1-212ENST00000485871 GCLCP48506 637 aaPredicted RBP12.89□□□□□ -0.35
SND1-212ENST00000485871 INHBEP58166 350 aa12.89□□□□□ -0.35
SND1-212ENST00000485871 RPS6P62753 249 aaKnown RBP12.89□□□□□ -0.35
SND1-212ENST00000485871 ERVK-9P63128 1117 aa12.89□□□□□ -0.35
SND1-212ENST00000485871 ERVK-24P63145 666 aa12.89□□□□□ -0.35
SND1-212ENST00000485871 SHCBP1Q8NEM2 672 aa12.89□□□□□ -0.35
SND1-212ENST00000485871 SYTL5Q8TDW5 730 aaPredicted RBP12.89□□□□□ -0.35
SND1-212ENST00000485871 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
SND1-212ENST00000485871 MBOAT7Q96N66 472 aa12.89□□□□□ -0.35
SND1-212ENST00000485871 PARK7Q99497 189 aaKnown RBP12.89□□□□□ -0.35
SND1-212ENST00000485871 PAGR1Q9BTK6 254 aa12.89□□□□□ -0.35
SND1-212ENST00000485871 ACAD9Q9H845 621 aa12.89□□□□□ -0.35
SND1-212ENST00000485871 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
SND1-212ENST00000485871 DOCK3Q8IZD9 2030 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 PPP6R2O75170 966 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
SND1-212ENST00000485871 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
SND1-212ENST00000485871 CYP3A4P08684 503 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 CIITAP33076 1130 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 COPB2P35606 906 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
SND1-212ENST00000485871 ORC2Q13416 577 aaPredicted RBP12.88□□□□□ -0.35
SND1-212ENST00000485871 BAATQ14032 418 aaPredicted RBP12.88□□□□□ -0.35
SND1-212ENST00000485871 PLS1Q14651 629 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 ZNF174Q15697 407 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
SND1-212ENST00000485871 MOXD1Q6UVY6 613 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 FCHSD1Q86WN1 690 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 CYP39A1Q9NYL5 469 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
SND1-212ENST00000485871 MCM3APO60318 1980 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 CYP3A7-CYP3A51PA0A087WV96 503 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 SPDYE3A6NKU9 549 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 SPTLC2O15270 562 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 TDP2O95551 362 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 SLC25A27O95847 323 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 BCRP11274 1271 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 ERCC3P19447 782 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 PTPREP23469 700 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 CYP3A7P24462 503 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 USP11P51784 963 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 ZNF445P59923 1031 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 SREBF2Q12772 1141 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 STK38Q15208 465 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
SND1-212ENST00000485871 FAM110CQ1W6H9 321 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 PPP4R3AQ6IN85 833 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 NSMFQ6X4W1 530 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 KCNG4Q8TDN1 519 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
SND1-212ENST00000485871 LENG9Q96B70 501 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 PURBQ96QR8 312 aaKnown RBP12.87□□□□□ -0.35
SND1-212ENST00000485871 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 PORCNQ9H237 461 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 TMEM60Q9H2L4 133 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 FBXO2Q9UK22 296 aaPredicted RBP12.87□□□□□ -0.35
SND1-212ENST00000485871 ZSWIM8A7E2V4 1837 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 ASTN1O14525 1302 aa12.87□□□□□ -0.35
SND1-212ENST00000485871 DNAJC25-GNG10A0A024R161 153 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 SLC37A4O43826 429 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 BMP15O95972 392 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 MARCKSP29966 332 aaPredicted RBP12.86□□□□□ -0.35
SND1-212ENST00000485871 MCM7P33993 719 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 PTGDRQ13258 359 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 LETM2Q2VYF4 491 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 ANKRD13CQ8N6S4 541 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 GPRC5AQ8NFJ5 357 aa12.86□□□□□ -0.35
SND1-212ENST00000485871 FGD4Q96M96 766 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms