RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 SYNRGQ9UMZ2 1314 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 TRIM49BA6NDI0 452 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 E9PMD0 336 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 FZD9O00144 591 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 ZBED4O75132 1171 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 NT5C2P49902 561 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 APOBEC3FQ8IUX4 373 aaKnown RBP12.53□□□□□ -0.4
PEX1-208ENST00000484913 NELFCDQ8IXH7 590 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 VPS16Q9H269 839 aa12.53□□□□□ -0.4
PEX1-208ENST00000484913 VCAM1P19320 739 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 CHMP4BP1P59074 171 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 SV2BQ7L1I2 683 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 DPF2Q92785 391 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 MRPL11Q9Y3B7 192 aaKnown RBP12.52□□□□□ -0.4
PEX1-208ENST00000484913 POTEFA5A3E0 1075 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 POTEIP0CG38 1075 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 NF2P35240 595 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 STIM1Q13586 685 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 POTEGQ6S5H5 508 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 EEPD1Q7L9B9 569 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.4
PEX1-208ENST00000484913 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.4
PEX1-208ENST00000484913 MKL1Q969V6 931 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 GMCL1Q96IK5 515 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 TMX1Q9H3N1 280 aa12.52□□□□□ -0.4
PEX1-208ENST00000484913 PLIN4Q96Q06 1357 aa12.52□□□□□ -0.41
PEX1-208ENST00000484913 SUPT20HL1Q3ZLR7 823 aa12.52□□□□□ -0.41
PEX1-208ENST00000484913 GPC2Q8N158 579 aa12.52□□□□□ -0.41
PEX1-208ENST00000484913 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.41
PEX1-208ENST00000484913 PRKCSHP14314 528 aaPredicted RBP12.52□□□□□ -0.41
PEX1-208ENST00000484913 CTTNQ14247 550 aaKnown RBP12.52□□□□□ -0.41
PEX1-208ENST00000484913 SNRNP48Q6IEG0 339 aaKnown RBP12.52□□□□□ -0.41
PEX1-208ENST00000484913 GMCL1P1Q8NEA9 526 aa12.52□□□□□ -0.41
PEX1-208ENST00000484913 NELFBQ8WX92 580 aa12.52□□□□□ -0.41
PEX1-208ENST00000484913 NPHP3-ACAD11A0A0J9YXS1 232 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 ARL6IP4Q66PJ3 421 aaKnown RBP12.51□□□□□ -0.41
PEX1-208ENST00000484913 RBM43Q6ZSC3 357 aaKnown RBP12.51□□□□□ -0.41
PEX1-208ENST00000484913 DAGLBQ8NCG7 672 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 PIGOQ8TEQ8 1089 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 TAB2Q9NYJ8 693 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
PEX1-208ENST00000484913 ATRNL1Q5VV63 1379 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 TPM3P06753 285 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 BMP6P22004 513 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 MAP1SQ66K74 1059 aaPredicted RBP12.51□□□□□ -0.41
PEX1-208ENST00000484913 PRPF38AQ8NAV1 312 aaKnown RBP12.51□□□□□ -0.41
PEX1-208ENST00000484913 ZNF280CQ8ND82 737 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 AS3MTQ9HBK9 375 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 RGL1Q9NZL6 768 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 GAS7O60861 476 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 FCER1AP12319 257 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
PEX1-208ENST00000484913 FEM1BQ9UK73 627 aa12.51□□□□□ -0.41
PEX1-208ENST00000484913 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
PEX1-208ENST00000484913 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
PEX1-208ENST00000484913 CCDC144BQ3MJ40 725 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 KMT5BQ4FZB7 885 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 ANKRD20A12PQ8NF67 263 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 CLMNQ96JQ2 1002 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 VPS33BQ9H267 617 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 MAGEC2Q9UBF1 373 aaPredicted RBP12.5□□□□□ -0.41
PEX1-208ENST00000484913 FAM170AA1A519 330 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 SFI1A8K8P3 1242 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 MEIS2O14770 477 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 NRDCO43847 1150 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 CAVIN2O95810 425 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 ZNF280AP59817 542 aaPredicted RBP12.5□□□□□ -0.41
PEX1-208ENST00000484913 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 ZKSCAN5Q9Y2L8 839 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 MYH4Q9Y623 1939 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 N4BP3O15049 544 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
PEX1-208ENST00000484913 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
PEX1-208ENST00000484913 LRCH2Q5VUJ6 765 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 ILDR2Q71H61 639 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 GPBP1Q86WP2 473 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 NCAPG2Q86XI2 1143 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 LARP4BQ92615 738 aaKnown RBP12.5□□□□□ -0.41
PEX1-208ENST00000484913 TRERF1Q96PN7 1200 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 PYCARDQ9ULZ3 195 aa12.5□□□□□ -0.41
PEX1-208ENST00000484913 FAM86B1E9PN63 330 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 FAM86B2P0C5J1 330 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 AMPD3Q01432 767 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 ARHGEF16Q5VV41 709 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 FAM160B2Q86V87 743 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 MLKLQ8NB16 471 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 RNF146Q9NTX7 359 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 CDK5RAP2Q96SN8 1893 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 ESYT2A0FGR8 921 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 NPM3O75607 178 aaKnown RBP12.49□□□□□ -0.41
PEX1-208ENST00000484913 MUM1L1Q5H9M0 696 aa12.49□□□□□ -0.41
PEX1-208ENST00000484913 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms