RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CWC27Q6UX04 472 aaKnown RBP10.59□□□□□ -0.71
COL8A1-207ENST00000483969 CCDC129Q6ZRS4 1044 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 C16orf86Q6ZW13 317 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 ANKRD23Q86SG2 305 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
COL8A1-207ENST00000483969 TRIM11Q96F44 468 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 DYNLL2Q96FJ2 89 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 PTPN18Q99952 460 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 ZFYVE28Q9HCC9 887 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 NEUROD4Q9HD90 331 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 ZBTB21Q9ULJ3 1066 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 TRPM7Q96QT4 1865 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 CYP2D7A0A087X1C5 515 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 A0A0D9SFI3 127 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 A0A0G2JLL6 359 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-207ENST00000483969 SERTM1A2A2V5 107 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 USP17L10C9JJH3 530 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 IGF2BP3O00425 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL8A1-207ENST00000483969 SIN3BO75182 1162 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 TBC1D8O95759 1140 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 PDE4BQ07343 736 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 PABPC4Q13310 644 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL8A1-207ENST00000483969 RAB3GAP1Q15042 981 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 LRRC69Q6ZNQ3 347 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 TMEM179Q6ZVK1 233 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 PRRT2Q7Z6L0 340 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-207ENST00000483969 SYT9Q86SS6 491 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 DEPDC4Q8N2C3 294 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 EPB41L4AQ9HCS5 686 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-207ENST00000483969 TMOD4Q9NZQ9 345 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 MYH13Q9UKX3 1938 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 CCDC171Q6TFL3 1326 aa10.58□□□□□ -0.72
COL8A1-207ENST00000483969 MYH2Q9UKX2 1941 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 BTBD19C9JJ37 291 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 PDHXO00330 501 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 FGAP02671 866 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 HSPD1P10809 573 aaKnown RBP10.57□□□□□ -0.72
COL8A1-207ENST00000483969 USP14P54578 494 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 BACE1P56817 501 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 PSMA6P60900 246 aaKnown RBP10.57□□□□□ -0.72
COL8A1-207ENST00000483969 JAG1P78504 1218 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 TAF1CQ15572 869 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-207ENST00000483969 NOM1Q5C9Z4 860 aaKnown RBP10.57□□□□□ -0.72
COL8A1-207ENST00000483969 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 CCDC84Q86UT8 332 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-207ENST00000483969 FAM43AQ8N2R8 423 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 MDFIQ99750 246 aa10.57□□□□□ -0.72
COL8A1-207ENST00000483969 POLR2AP24928 1970 aaKnown RBP10.56□□□□□ -0.72
COL8A1-207ENST00000483969 CHMLP26374 656 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 PPARAQ07869 468 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 VPS53Q5VIR6 699 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 ZNF589Q86UQ0 364 aaPredicted RBP10.56□□□□□ -0.72
COL8A1-207ENST00000483969 TNS4Q8IZW8 715 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 STK11IPQ8N1F8 1099 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 SLC44A5Q8NCS7 719 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 PLVAPQ9BX97 442 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 KANSL2Q9H9L4 492 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 CTNNA3Q9UI47 895 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 SLC45A1Q9Y2W3 748 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 MAST2Q6P0Q8 1798 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
COL8A1-207ENST00000483969 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 ZNF213O14771 459 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 FKTNO75072 461 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 AKR1B1P15121 316 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 HMGCS2P54868 508 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 CRHR2Q13324 411 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 MOGSQ13724 837 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 SEPT2Q15019 361 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 ARHGEF6Q15052 776 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 BMP2KLQ5H9B9 411 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 POM121Q96HA1 1249 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 FEZ1Q99689 392 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 DSCC1Q9BVC3 393 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 KIAA1683Q9H0B3 1180 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 SH2D4AQ9H788 454 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.55□□□□□ -0.72
COL8A1-207ENST00000483969 AGTPBP1Q9UPW5 1226 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 RAD50Q92878 1312 aa10.55□□□□□ -0.72
COL8A1-207ENST00000483969 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 FOXP2O15409 715 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 TLR2O60603 784 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 PCP11498 1178 aaKnown RBP10.54□□□□□ -0.72
COL8A1-207ENST00000483969 RASA1P20936 1047 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 GUCY1A2P33402 732 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 SP3Q02447 781 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 SHROOM1Q2M3G4 852 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-207ENST00000483969 PRRT3Q5FWE3 981 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 TBCELQ5QJ74 424 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 C1orf53Q5VUE5 145 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 CASC1Q6TDU7 716 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 TNFRSF25Q93038 417 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 PARK7Q99497 189 aaKnown RBP10.54□□□□□ -0.72
COL8A1-207ENST00000483969 RNF41Q9H4P4 317 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-207ENST00000483969 ZMYM6O95789 1325 aa10.54□□□□□ -0.72
COL8A1-207ENST00000483969 M0R2N6 131 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms