RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SLC5A4Q9NY91 659 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 SPEF1Q9Y4P9 236 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 PHLDB1Q86UU1 1377 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 NPTXRO95502 500 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 EYA4O95677 639 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 U2AF1L5P0DN76 240 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-214ENST00000483925 PLCG1P19174 1290 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 LTKP29376 864 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 CCNFP41002 786 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 YARSP54577 528 aaKnown RBP5.68□□□□□ -1.5
PTCD3-214ENST00000483925 U2AF1Q01081 240 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTCD3-214ENST00000483925 ITKQ08881 620 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 MLECQ14165 292 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 CBX2Q14781 532 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-214ENST00000483925 MLC1Q15049 377 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 NR0B2Q15466 257 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 FAM102BQ5T8I3 360 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 CNNM4Q6P4Q7 775 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 RUFY4Q6ZNE9 571 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 ZBTB46Q86UZ6 589 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 LRRTM3Q86VH5 581 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 SPPL2CQ8IUH8 684 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 TAB3Q8N5C8 712 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-214ENST00000483925 FAM13CQ8NE31 585 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 WDR66Q8TBY9 1149 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 CHMP4CQ96CF2 233 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 CDC6Q99741 560 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 DHRS4Q9BTZ2 278 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 TARS2Q9BW92 718 aaKnown RBP5.68□□□□□ -1.5
PTCD3-214ENST00000483925 PHAXQ9H814 394 aaKnown RBP5.68□□□□□ -1.5
PTCD3-214ENST00000483925 ANAPC4Q9UJX5 808 aa5.68□□□□□ -1.5
PTCD3-214ENST00000483925 MEIS3P2A8K0S8 358 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 UPK3BL1B0FP48 263 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 UPK3BL2E5RIL1 263 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 NRDCO43847 1150 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 BRINP1O60477 761 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 RAPGEF3O95398 923 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 FGAP02671 866 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 HSP90AA1P07900 732 aaKnown RBP5.67□□□□□ -1.5
PTCD3-214ENST00000483925 RAPGEF1Q13905 1077 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 MORC3Q14149 939 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 VHLLQ6RSH7 139 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 RNF141Q8WVD5 230 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 KISS1RQ969F8 398 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-214ENST00000483925 MRPL4Q9BYD3 311 aaKnown RBP5.67□□□□□ -1.5
PTCD3-214ENST00000483925 MCOLN1Q9GZU1 580 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 PUS7LQ9H0K6 701 aaKnown RBP5.67□□□□□ -1.5
PTCD3-214ENST00000483925 CHST12Q9NRB3 414 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 PCDHA11Q9Y5I1 949 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 CORINQ9Y5Q5 1042 aa5.67□□□□□ -1.5
PTCD3-214ENST00000483925 NPHP1O15259 732 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 SUSD5O60279 629 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 PEX10O60683 326 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 LRRN2O75325 713 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 CD53P19397 219 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 CTSWP56202 376 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 DLG4P78352 724 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 CHRNEQ04844 493 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 MTMR1Q13613 665 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 SNX17Q15036 470 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 SLC10A6Q3KNW5 377 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 TIGD5Q53EQ6 642 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 TMEM201Q5SNT2 666 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 WDR78Q5VTH9 848 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 INTS3Q68E01 1043 aaKnown RBP5.66□□□□□ -1.5
PTCD3-214ENST00000483925 TMEM132EQ6IEE7 984 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 ZNF605Q86T29 641 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 DGKHQ86XP1 1220 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 IFNL3Q8IZI9 196 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 BAHD1Q8TBE0 780 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-214ENST00000483925 LEO1Q8WVC0 666 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-214ENST00000483925 DDX1Q92499 740 aaKnown RBP5.66□□□□□ -1.5
PTCD3-214ENST00000483925 MTMR8Q96EF0 704 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 SMAD5Q99717 465 aaKnown RBP5.66□□□□□ -1.5
PTCD3-214ENST00000483925 SWAP70Q9UH65 585 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 ZNF180Q9UJW8 692 aa5.66□□□□□ -1.5
PTCD3-214ENST00000483925 YBX2Q9Y2T7 364 aaKnown RBP5.66□□□□□ -1.5
PTCD3-214ENST00000483925 SEMA7AO75326 666 aa5.65□□□□□ -1.5
PTCD3-214ENST00000483925 RFPL1O75677 317 aa5.65□□□□□ -1.5
PTCD3-214ENST00000483925 IFIT2P09913 472 aaKnown RBP5.65□□□□□ -1.5
PTCD3-214ENST00000483925 NAT2P11245 290 aa5.65□□□□□ -1.5
PTCD3-214ENST00000483925 L1CAMP32004 1257 aa5.65□□□□□ -1.5
PTCD3-214ENST00000483925 PURAQ00577 322 aaKnown RBP5.65□□□□□ -1.5
PTCD3-214ENST00000483925 FOXD4Q12950 439 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-214ENST00000483925 C10orf62Q5T681 223 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-214ENST00000483925 SCUBE1Q8IWY4 988 aa5.65□□□□□ -1.5
PTCD3-214ENST00000483925 SLFN12Q8IYM2 578 aa5.65□□□□□ -1.5
PTCD3-214ENST00000483925 PAF1Q8N7H5 531 aa5.65□□□□□ -1.5
PTCD3-214ENST00000483925 HOOK2Q96ED9 719 aa5.65□□□□□ -1.5
PTCD3-214ENST00000483925 INTS4Q96HW7 963 aaKnown RBP5.65□□□□□ -1.5
PTCD3-214ENST00000483925 ZNF512BQ96KM6 892 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-214ENST00000483925 ZNF552Q9H707 407 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-214ENST00000483925 MRPS23Q9Y3D9 190 aaKnown RBP5.65□□□□□ -1.5
PTCD3-214ENST00000483925 TRAV20A0A0B4J274 112 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 MYOCOSA0A1B0GUC4 107 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 GPR39O43194 453 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 GRIN3BO60391 1043 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 PDE6BP35913 854 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 BUD31P41223 144 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-214ENST00000483925 STRN3Q13033 797 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms