RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 IFIT3O14879 490 aaKnown RBP23.09■■□□□ 1.29
HPS4-213ENST00000483631 TXNP10599 105 aaKnown RBP23.09■■□□□ 1.29
HPS4-213ENST00000483631 GRM4Q14833 912 aa23.09■■□□□ 1.29
HPS4-213ENST00000483631 STXBP2Q15833 593 aa23.09■■□□□ 1.29
HPS4-213ENST00000483631 RMDN3Q96TC7 470 aa23.09■■□□□ 1.29
HPS4-213ENST00000483631 MTG1Q9BT17 334 aaPredicted RBP23.09■■□□□ 1.29
HPS4-213ENST00000483631 RIOX1Q9H6W3 641 aa23.09■■□□□ 1.29
HPS4-213ENST00000483631 VAT1LQ9HCJ6 419 aa23.09■■□□□ 1.29
HPS4-213ENST00000483631 GPHNQ9NQX3 736 aaPredicted RBP23.09■■□□□ 1.29
HPS4-213ENST00000483631 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.08■■□□□ 1.29
HPS4-213ENST00000483631 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.08■■□□□ 1.29
HPS4-213ENST00000483631 SUPT20HL2P0C7V6 817 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 HSD17B4P51659 736 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 TROAPQ12815 778 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 WTAPQ15007 396 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 TMEM240Q5SV17 173 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 CCDC62Q6P9F0 684 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 TBC1D5Q92609 795 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 GUCD1Q96NT3 240 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 TAAR1Q96RJ0 339 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.08■■□□□ 1.296e-9■■□□□ 13.1
HPS4-213ENST00000483631 ALDH8A1Q9H2A2 487 aaPredicted RBP23.08■■□□□ 1.29
HPS4-213ENST00000483631 HIPK3Q9H422 1215 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 COL20A1Q9P218 1284 aa23.08■■□□□ 1.29
HPS4-213ENST00000483631 B4GALT4O60513 344 aa23.07■■□□□ 1.28
HPS4-213ENST00000483631 CSF2RAP15509 400 aa23.07■■□□□ 1.28
HPS4-213ENST00000483631 PTPN11Q06124 597 aaPredicted RBP23.07■■□□□ 1.28
HPS4-213ENST00000483631 RASIP1Q5U651 963 aa23.07■■□□□ 1.28
HPS4-213ENST00000483631 MAP3K14Q99558 947 aa23.07■■□□□ 1.28
HPS4-213ENST00000483631 PPP1R12CQ9BZL4 782 aa23.07■■□□□ 1.28
HPS4-213ENST00000483631 IL23AQ9NPF7 189 aa23.07■■□□□ 1.28
HPS4-213ENST00000483631 EIF3JO75822 258 aaKnown RBP23.06■■□□□ 1.28
HPS4-213ENST00000483631 PSMC6P62333 389 aa23.06■■□□□ 1.28
HPS4-213ENST00000483631 ARHGEF16Q5VV41 709 aa23.06■■□□□ 1.28
HPS4-213ENST00000483631 NFRKBQ6P4R8 1299 aa23.06■■□□□ 1.28
HPS4-213ENST00000483631 STOX1Q6ZVD7 989 aa23.06■■□□□ 1.28
HPS4-213ENST00000483631 C16orf59Q7L2K0 433 aa23.06■■□□□ 1.28
HPS4-213ENST00000483631 MB21D2Q8IYB1 491 aaPredicted RBP23.06■■□□□ 1.28
HPS4-213ENST00000483631 SLC17A8Q8NDX2 589 aa23.06■■□□□ 1.28
HPS4-213ENST00000483631 NOC4LQ9BVI4 516 aaKnown RBP23.06■■□□□ 1.28
HPS4-213ENST00000483631 SEMA6BQ9H3T3 888 aa23.06■■□□□ 1.28
HPS4-213ENST00000483631 PCDHA1Q9Y5I3 950 aa23.06■■□□□ 1.28
HPS4-213ENST00000483631 RBM8AQ9Y5S9 174 aaKnown RBP23.06■■□□□ 1.28
HPS4-213ENST00000483631 OPLAHO14841 1288 aa23.05■■□□□ 1.28
HPS4-213ENST00000483631 CFBP00751 764 aa23.05■■□□□ 1.28
HPS4-213ENST00000483631 MYL3P08590 195 aa23.05■■□□□ 1.28
HPS4-213ENST00000483631 CATIPQ7Z7H3 387 aa23.05■■□□□ 1.28
HPS4-213ENST00000483631 IGDCC4Q8TDY8 1250 aa23.05■■□□□ 1.28
HPS4-213ENST00000483631 TRPV6Q9H1D0 765 aa23.05■■□□□ 1.28
HPS4-213ENST00000483631 PXMP2Q9NR77 195 aa23.05■■□□□ 1.28
HPS4-213ENST00000483631 PPP1R11O60927 126 aaPredicted RBP23.04■■□□□ 1.28
HPS4-213ENST00000483631 ARIH2O95376 493 aa23.04■■□□□ 1.28
HPS4-213ENST00000483631 GH1P01241 217 aa23.04■■□□□ 1.28
HPS4-213ENST00000483631 CYP2C18P33260 490 aa23.04■■□□□ 1.28
HPS4-213ENST00000483631 TMEM67Q5HYA8 995 aa23.04■■□□□ 1.28
HPS4-213ENST00000483631 EMID1Q96A84 441 aaPredicted RBP23.04■■□□□ 1.28
HPS4-213ENST00000483631 MTIF3Q9H2K0 278 aaKnown RBP23.04■■□□□ 1.28
HPS4-213ENST00000483631 TAF6LQ9Y6J9 622 aa23.04■■□□□ 1.28
HPS4-213ENST00000483631 PNMA6FA0A0J9YX94 578 aa23.03■■□□□ 1.28
HPS4-213ENST00000483631 NR3C2P08235 984 aa23.03■■□□□ 1.28
HPS4-213ENST00000483631 SMARCA1P28370 1054 aa23.03■■□□□ 1.28
HPS4-213ENST00000483631 ANTXR2P58335 489 aa23.03■■□□□ 1.28
HPS4-213ENST00000483631 HERVK_113Q902F9 699 aa23.03■■□□□ 1.28
HPS4-213ENST00000483631 COPS5Q92905 334 aa23.03■■□□□ 1.28
HPS4-213ENST00000483631 DDAH1O94760 285 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 EIF2AK2P19525 551 aaKnown RBP23.02■■□□□ 1.28
HPS4-213ENST00000483631 SLC35G1Q2M3R5 365 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 NBPF20Q3BBV1 942 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 KCNV1Q6PIU1 500 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 SEPT14Q6ZU15 432 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 ZNF365Q70YC5 407 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 RPUSD2Q8IZ73 545 aaKnown RBP23.02■■□□□ 1.28
HPS4-213ENST00000483631 TMTC2Q8N394 836 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 PDCD2LQ9BRP1 358 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 LSG1Q9H089 658 aaKnown RBP23.02■■□□□ 1.28
HPS4-213ENST00000483631 TTYH1Q9H313 450 aaPredicted RBP23.02■■□□□ 1.28
HPS4-213ENST00000483631 SENP2Q9HC62 589 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 DDX41Q9UJV9 622 aaKnown RBP23.02■■□□□ 1.28
HPS4-213ENST00000483631 MYH7BA7E2Y1 1941 aa23.02■■□□□ 1.28
HPS4-213ENST00000483631 CYTH3O43739 400 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 PFKMP08237 780 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 ARHGAP1Q07960 439 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 BMP2KLQ5H9B9 411 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 CASC1Q6TDU7 716 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 CENPQQ7L2Z9 268 aaPredicted RBP23.01■■□□□ 1.27
HPS4-213ENST00000483631 HOMER1Q86YM7 354 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 TMEM87BQ96K49 555 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 FAM161BQ96MY7 647 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 PIGSQ96S52 555 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 CDX2Q99626 313 aaPredicted RBP23.01■■□□□ 1.27
HPS4-213ENST00000483631 ESYT1Q9BSJ8 1104 aa23.01■■□□□ 1.27
HPS4-213ENST00000483631 GCOM1H8Y6P7 765 aaPredicted RBP23■■□□□ 1.27
HPS4-213ENST00000483631 FGBP02675 491 aa23■■□□□ 1.27
HPS4-213ENST00000483631 MMP3P08254 477 aa23■■□□□ 1.27
HPS4-213ENST00000483631 POLR2MP0CAP2 368 aa23■■□□□ 1.27
HPS4-213ENST00000483631 ACRP10323 421 aa23■■□□□ 1.27
HPS4-213ENST00000483631 DNAJB2P25686 324 aa23■■□□□ 1.27
HPS4-213ENST00000483631 KIF5BP33176 963 aa23■■□□□ 1.27
HPS4-213ENST00000483631 MCM5P33992 734 aa23■■□□□ 1.27
HPS4-213ENST00000483631 LY6KQ17RY6 165 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms