RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 CATSPERGQ6ZRH7 1159 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 PRRT2Q7Z6L0 340 aaPredicted RBP14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 FERMT2Q96AC1 680 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 ATG4CQ96DT6 458 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 HTATIP2Q9BUP3 242 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 SLC38A10Q9HBR0 1119 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 RAVER2Q9HCJ3 691 aaKnown RBP14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 FAM13BQ9NYF5 915 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 A0A1W2PQ27 194 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 A0A1W2PQ64 194 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 A0A1W2PQD8 194 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 LAD1O00515 517 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 VWA5AO00534 786 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 KINO60870 393 aaKnown RBP14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 OAZ1P54368 228 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 PLS1Q14651 629 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 PTPAQ15257 358 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 CCDC183Q5T5S1 534 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 USP17L6PQ6QN14 398 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 PGBD1Q96JS3 809 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 AGBL1Q96MI9 1066 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 ANO3Q9BYT9 981 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 R3HDMLQ9H3Y0 253 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 DDX19AQ9NUU7 478 aaKnown RBP14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 KCNH4Q9UQ05 1017 aa14.16□□□□□ -0.14
TSPAN1-208ENST00000482928 NEMFO60524 1076 aa14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 MYCP01106 439 aaPredicted RBP14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 ZNF76P36508 570 aa14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 PTGDRQ13258 359 aa14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 FCHSD1Q86WN1 690 aa14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 HOMER2Q9NSB8 354 aa14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 PNMA3Q9UL41 463 aa14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 AGTPBP1Q9UPW5 1226 aa14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 EYSQ5T1H1 3165 aa14.15□□□□□ -0.14
TSPAN1-208ENST00000482928 ADAMTS3O15072 1205 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 CETPP11597 493 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 GCFC2P16383 781 aaKnown RBP14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 TXLNAP40222 546 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 CLK2P49760 499 aaKnown RBP14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 GTF2A2P52657 109 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 ATP2C1P98194 919 aaPredicted RBP14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 FAM160A1Q05DH4 1040 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 TKFCQ3LXA3 575 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 TREML2Q5T2D2 321 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 SNRNP48Q6IEG0 339 aaKnown RBP14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 ALYREFQ86V81 257 aaKnown RBP14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 SAMD3Q8N6K7 520 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 MB21D1Q8N884 522 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 CCDC34Q96HJ3 373 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 WNK4Q96J92 1243 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 CFHR5Q9BXR6 569 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 NUP62CLQ9H1M0 184 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 SRPRBQ9Y5M8 271 aaKnown RBP14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 MORC2Q9Y6X9 1032 aaPredicted RBP14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 LOC285556D6RIA3 1793 aa14.14□□□□□ -0.15
TSPAN1-208ENST00000482928 PIK3CDO00329 1044 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 MEIS2O14770 477 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 TAL1P17542 331 aaPredicted RBP14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 PTPREP23469 700 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 CMA1P23946 247 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 HOXA13P31271 388 aaPredicted RBP14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 CALCRLQ16602 461 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 TMEM266Q2M3C6 531 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 ARL6IP4Q66PJ3 421 aaKnown RBP14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 DTHD1Q6ZMT9 781 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 TRERF1Q96PN7 1200 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 TEX13BQ9BXU2 312 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 TNMDQ9H2S6 317 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 RNF146Q9NTX7 359 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 DACT1Q9NYF0 836 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 FBXO2Q9UK22 296 aaPredicted RBP14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 HCN4Q9Y3Q4 1203 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 ZNF536O15090 1300 aa14.13□□□□□ -0.15
TSPAN1-208ENST00000482928 A0A1B0GVL5 298 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 VWA3AA6NCI4 1184 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 SPDYE16A6NNV3 312 aaPredicted RBP14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 OR52Z1P0C646 297 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 LIG1P18858 919 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 HOXA7P31268 230 aaPredicted RBP14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 TM4SF4P48230 202 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 USP11P51784 963 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 SLC9C1Q4G0N8 1177 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 ZNF579Q8NAF0 562 aaKnown RBP14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 RASSF8Q8NHQ8 419 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 ERO1AQ96HE7 468 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 CLIC6Q96NY7 704 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 RAB34Q9BZG1 259 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 MAP3K20Q9NYL2 800 aaKnown RBP14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 DDX25Q9UHL0 483 aaKnown RBP14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 RABGAP1Q9Y3P9 1069 aa14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 ARIH1Q9Y4X5 557 aaPredicted RBP14.12□□□□□ -0.15
TSPAN1-208ENST00000482928 CCL15-CCL14A0A0B4J2E2 113 aa14.11□□□□□ -0.15
TSPAN1-208ENST00000482928 ZBTB48P10074 688 aaPredicted RBP14.11□□□□□ -0.15
TSPAN1-208ENST00000482928 PFKFB1P16118 471 aa14.11□□□□□ -0.15
TSPAN1-208ENST00000482928 LONP1P36776 959 aaKnown RBP14.11□□□□□ -0.15
TSPAN1-208ENST00000482928 STAT3P40763 770 aa14.11□□□□□ -0.15
TSPAN1-208ENST00000482928 PRPHP41219 470 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms