RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 FIGNQ5HY92 759 aa12.22□□□□□ -0.45
RPGR-208ENST00000482855 FAM196AQ6ZSG2 479 aa12.22□□□□□ -0.45
RPGR-208ENST00000482855 IFNL2Q8IZJ0 200 aa12.22□□□□□ -0.45
RPGR-208ENST00000482855 CSGALNACT2Q8N6G5 542 aa12.22□□□□□ -0.45
RPGR-208ENST00000482855 RNF14Q9UBS8 474 aa12.22□□□□□ -0.45
RPGR-208ENST00000482855 PLAAQ9Y263 795 aa12.22□□□□□ -0.45
RPGR-208ENST00000482855 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.45
RPGR-208ENST00000482855 AKR1B10O60218 316 aa12.21□□□□□ -0.45
RPGR-208ENST00000482855 MBD4O95243 580 aa12.21□□□□□ -0.45
RPGR-208ENST00000482855 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.45
RPGR-208ENST00000482855 MTIF2P46199 727 aaKnown RBP12.21□□□□□ -0.45
RPGR-208ENST00000482855 PKN1Q16512 942 aa12.21□□□□□ -0.45
RPGR-208ENST00000482855 C2CD5Q86YS7 1000 aa12.21□□□□□ -0.45
RPGR-208ENST00000482855 MS4A14Q96JA4 679 aa12.21□□□□□ -0.45
RPGR-208ENST00000482855 TMBIM4Q9HC24 238 aa12.21□□□□□ -0.45
RPGR-208ENST00000482855 TSKSQ9UJT2 592 aa12.21□□□□□ -0.45
RPGR-208ENST00000482855 TCRBV5S4A2TA0A5A2 114 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 GCOM1H8Y6P7 765 aaPredicted RBP12.21□□□□□ -0.46
RPGR-208ENST00000482855 MYZAPP0CAP1 466 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 SCTRP47872 440 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 IRX1P78414 480 aaPredicted RBP12.21□□□□□ -0.46
RPGR-208ENST00000482855 IFIT5Q13325 482 aaKnown RBP12.21□□□□□ -0.46
RPGR-208ENST00000482855 SPRED3Q2MJR0 410 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 TTI2Q6NXR4 508 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 TLDC1Q6P9B6 456 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 FAM114A1Q8IWE2 563 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 CACNA2D3Q8IZS8 1091 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 ZNF512BQ96KM6 892 aaPredicted RBP12.21□□□□□ -0.46
RPGR-208ENST00000482855 MTA3Q9BTC8 594 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.46
RPGR-208ENST00000482855 TLR10Q9BXR5 811 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 RTL9Q8NET4 1388 aa12.21□□□□□ -0.46
RPGR-208ENST00000482855 XRCC4Q13426 336 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 PPP2R5BQ15173 497 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 NAIF1Q69YI7 327 aaPredicted RBP12.2□□□□□ -0.46
RPGR-208ENST00000482855 CASKIN2Q8WXE0 1202 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 IQCDQ96DY2 449 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 RSRC1Q96IZ7 334 aaKnown RBP12.2□□□□□ -0.46
RPGR-208ENST00000482855 SEC16BQ96JE7 1060 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 CNOT6LQ96LI5 555 aaKnown RBP12.2□□□□□ -0.46
RPGR-208ENST00000482855 ARHGAP20Q9P2F6 1191 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 PLAGL2Q9UPG8 496 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 BTAF1O14981 1849 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 TRAPPC3O43617 180 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 RTN2O75298 545 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 MCM7P33993 719 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 EIF4A3P38919 411 aaKnown RBP12.2□□□□□ -0.46
RPGR-208ENST00000482855 MAGEA1P43355 309 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 KCNB1Q14721 858 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 NBPF9Q3BBW0 867 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 RASSF8Q8NHQ8 419 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 EEF2KMTQ96G04 330 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 NOX5Q96PH1 765 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 ARMT1Q9H993 441 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 DOT1LQ8TEK3 1739 aa12.2□□□□□ -0.46
RPGR-208ENST00000482855 PRPF3O43395 683 aaKnown RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 ATP2C2O75185 946 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 LCA5LO95447 670 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 RPSAP08865 295 aaKnown RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 HNRNPH3P31942 346 aaKnown RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 HSPA9P38646 679 aaKnown RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 EVA1CP58658 441 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 IL17AQ16552 155 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 LACTB2Q53H82 288 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 MSL1Q68DK7 614 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 LRIG3Q6UXM1 1119 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 ARMC9Q7Z3E5 817 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 P3H4Q92791 437 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 TNFRSF25Q93038 417 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 DCAF5Q96JK2 942 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 ERGIC2Q96RQ1 377 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 KRT12Q99456 494 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 NACAP1Q9BZK3 213 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 PLCB1Q9NQ66 1216 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■□□ 17.4
RPGR-208ENST00000482855 LEMD3Q9Y2U8 911 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 V9GY48 417 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 LONP1P36776 959 aaKnown RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 SLC8A3P57103 927 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 CABP4P57796 275 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 ZKSCAN8Q15776 578 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 CDC37Q16543 378 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 QPCTQ16769 361 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 KLHDC7AQ5VTJ3 777 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 ANKRD13CQ8N6S4 541 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 GIMAP8Q8ND71 665 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 DUSP9Q99956 384 aaKnown RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 RNF41Q9H4P4 317 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 BICDL2A1A5D9 508 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 GSG1L2A8MUP6 293 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 OPLAHO14841 1288 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 PJA2O43164 708 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 PPP1R12BO60237 982 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 MGRN1O60291 552 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms