RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 TTC39AQ5SRH9 613 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 CAVIN1Q6NZI2 390 aaKnown RBP8.99□□□□□ -0.97
SNX13-208ENST00000482558 LRSAM1Q6UWE0 723 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 ZNF438Q7Z4V0 828 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 DNAJC10Q8IXB1 793 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 TMTC2Q8N394 836 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 C8orf48Q96LL4 319 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 SRPK1Q96SB4 655 aaKnown RBP8.99□□□□□ -0.97
SNX13-208ENST00000482558 MAF1Q9H063 256 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 ZFATQ9P243 1243 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 ITGB4P16144 1822 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 CICQ96RK0 1608 aaPredicted RBP8.98□□□□□ -0.97
SNX13-208ENST00000482558 ROBO1Q9Y6N7 1651 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 KIAA1324LA8MWY0 1029 aaPredicted RBP8.98□□□□□ -0.97
SNX13-208ENST00000482558 PDE8AO60658 829 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 COBLO75128 1261 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 UQCRFS1P1P0C7P4 283 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 GRNP28799 593 aaKnown RBP8.98□□□□□ -0.97
SNX13-208ENST00000482558 GJB2P29033 226 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 HMGN5P82970 282 aaKnown RBP8.98□□□□□ -0.97
SNX13-208ENST00000482558 PLAURQ03405 335 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 ADCK5Q3MIX3 580 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 ATL3Q6DD88 541 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 Q6ZS46 218 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 NLRP10Q86W26 655 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 PPP1R9BQ96SB3 815 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 CEP89Q96ST8 783 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 NIF3L1Q9GZT8 377 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 SCAND2PQ9GZW5 306 aaPredicted RBP8.98□□□□□ -0.97
SNX13-208ENST00000482558 SIRPGQ9P1W8 387 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 ASAP1Q9ULH1 1129 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 KCNMB2Q9Y691 235 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 ELP1O95163 1332 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 MROH5Q6ZUA9 1318 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 WDR19Q8NEZ3 1342 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 WNK3Q9BYP7 1800 aa8.98□□□□□ -0.97
SNX13-208ENST00000482558 ANKRD36CQ5JPF3 1778 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 GOLIM4O00461 696 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 XYLBO75191 536 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 CTSWP56202 376 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 ENOX2Q16206 610 aaKnown RBP8.97□□□□□ -0.97
SNX13-208ENST00000482558 DDB1Q16531 1140 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 ME3Q16798 604 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 UVSSAQ2YD98 709 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 LARP1BQ659C4 914 aaKnown RBP8.97□□□□□ -0.97
SNX13-208ENST00000482558 CCSAPQ6IQ19 270 aaPredicted RBP8.97□□□□□ -0.97
SNX13-208ENST00000482558 PDE12Q6L8Q7 609 aaKnown RBP8.97□□□□□ -0.97
SNX13-208ENST00000482558 CCDC83Q8IWF9 413 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 GPATCH11Q8N954 259 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 GPT2Q8TD30 523 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 RELTQ969Z4 430 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 ZSCAN16Q9H4T2 348 aaPredicted RBP8.97□□□□□ -0.97
SNX13-208ENST00000482558 SPATA31A1Q5TZJ5 1347 aa8.97□□□□□ -0.97
SNX13-208ENST00000482558 F8W735 103 aaPredicted RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 IRS4O14654 1257 aaPredicted RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 DHX16O60231 1041 aaKnown RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 NRLP54845 237 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 TIMM10P62072 90 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 KRT85P78386 507 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 ATP2B3Q16720 1220 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 IMMTQ16891 758 aaKnown RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 ARSHQ5FYA8 562 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 METTL24Q5JXM2 366 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 CCDC183Q5T5S1 534 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 LDHAL6AQ6ZMR3 332 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 DDX46Q7L014 1031 aaKnown RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 ZNF589Q86UQ0 364 aaPredicted RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 MAP4K3Q8IVH8 894 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 ZNF34Q8IZ26 560 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 TTLL11Q8NHH1 800 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 SNX29Q8TEQ0 813 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 JARID2Q92833 1246 aaPredicted RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 ZNF274Q96GC6 653 aaPredicted RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 SETDB2Q96T68 719 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 AGXT2Q9BYV1 514 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 SMG9Q9H0W8 520 aaKnown RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 BSDC1Q9NW68 430 aaPredicted RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 TRMT112Q9UI30 125 aaKnown RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 TPCN1Q9ULQ1 816 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 MTMR6Q9Y217 621 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 AK5Q9Y6K8 562 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.98
SNX13-208ENST00000482558 NWD2Q9ULI1 1742 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 RTL9Q8NET4 1388 aa8.96□□□□□ -0.98
SNX13-208ENST00000482558 COL16A1Q07092 1604 aaPredicted RBP8.95□□□□□ -0.98
SNX13-208ENST00000482558 ZNF831Q5JPB2 1677 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 PNMA6FA0A0J9YX94 578 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 PFKFB2O60825 505 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 EIF5P55010 431 aaKnown RBP8.95□□□□□ -0.98
SNX13-208ENST00000482558 CHMP4BP1P59074 171 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 LRRC24Q50LG9 513 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 CLEC4GQ6UXB4 293 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 FERMT3Q86UX7 667 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 GAS2L3Q86XJ1 694 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 LPIN2Q92539 896 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 APPBP2Q92624 585 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 GTF3C6Q969F1 213 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 GPRASP2Q96D09 838 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 FAM89AQ96GI7 184 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms