RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 A6NJR5 290 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 B4DLN1 442 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 ACRP10323 421 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 PBX2P40425 430 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 MRPL12P52815 198 aaKnown RBP13.54□□□□□ -0.24
GARNL3-217ENST00000481875 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-217ENST00000481875 TMEM63BQ5T3F8 832 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 NFRKBQ6P4R8 1299 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 RNF207Q6ZRF8 634 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 EEPD1Q7L9B9 569 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 SCFD2Q8WU76 684 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 PURBQ96QR8 312 aaKnown RBP13.54□□□□□ -0.24
GARNL3-217ENST00000481875 TRPV6Q9H1D0 765 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 CXXC1Q9P0U4 656 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-217ENST00000481875 MSRAQ9UJ68 235 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 TET1Q8NFU7 2136 aa13.54□□□□□ -0.24
GARNL3-217ENST00000481875 GRXCR1A8MXD5 290 aa13.53□□□□□ -0.24
GARNL3-217ENST00000481875 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
GARNL3-217ENST00000481875 RPS6P62753 249 aaKnown RBP13.53□□□□□ -0.24
GARNL3-217ENST00000481875 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-217ENST00000481875 BRDTQ58F21 947 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-217ENST00000481875 ATXN2LQ8WWM7 1075 aaKnown RBP13.53□□□□□ -0.24
GARNL3-217ENST00000481875 ESR2Q92731 530 aa13.53□□□□□ -0.24
GARNL3-217ENST00000481875 GAS2L1Q99501 681 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-217ENST00000481875 MTG1Q9BT17 334 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-217ENST00000481875 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
GARNL3-217ENST00000481875 UMODL1Q5DID0 1318 aa13.53□□□□□ -0.24
GARNL3-217ENST00000481875 SCN5AQ14524 2016 aa13.52□□□□□ -0.24
GARNL3-217ENST00000481875 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 POU3F3P20264 500 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-217ENST00000481875 PTGS1P23219 599 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 RFC2P35250 354 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 PSMC6P62333 389 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 TJAP1Q5JTD0 557 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 TBC1D10CQ8IV04 446 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 USP38Q8NB14 1042 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 TOMM22Q9NS69 142 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 PCDHA11Q9Y5I1 949 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 RAD50Q92878 1312 aa13.52□□□□□ -0.25
GARNL3-217ENST00000481875 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
GARNL3-217ENST00000481875 TNKSO95271 1327 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
GARNL3-217ENST00000481875 HIP1O00291 1037 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 ZNF213O14771 459 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 GHRHRQ02643 423 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 PDE4DQ08499 809 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 PPP2R5BQ15173 497 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 RRP12Q5JTH9 1297 aaKnown RBP13.51□□□□□ -0.25
GARNL3-217ENST00000481875 CCDC62Q6P9F0 684 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 SLC30A10Q6XR72 485 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 IWS1Q96ST2 819 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 SLC28A3Q9HAS3 691 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 DIAPH3Q9NSV4 1193 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 SLC4A7Q9Y6M7 1214 aa13.51□□□□□ -0.25
GARNL3-217ENST00000481875 TANC1Q9C0D5 1861 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 CALML3P27482 149 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 CCL23P55773 120 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 HAND2P61296 217 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 ADGRE1Q14246 886 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 TTLL4Q14679 1199 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 NBPF20Q3BBV1 942 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 OTOP2Q7RTS6 562 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 SESTD1Q86VW0 696 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 IQCA1Q86XH1 822 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 PHOSPHO2Q8TCD6 241 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 FAM212AQ96EL1 285 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 DSCC1Q9BVC3 393 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 PRDM12Q9H4Q4 367 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
GARNL3-217ENST00000481875 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
GARNL3-217ENST00000481875 MAP3K20Q9NYL2 800 aaKnown RBP13.5□□□□□ -0.25
GARNL3-217ENST00000481875 MTMR7Q9Y216 660 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 MYH7BA7E2Y1 1941 aa13.5□□□□□ -0.25
GARNL3-217ENST00000481875 ABCB11O95342 1321 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 NUBP1P53384 320 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 ASPRV1Q53RT3 343 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 CASC1Q6TDU7 716 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 MCF2L2Q86YR7 1114 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 SAMD3Q8N6K7 520 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 PNMA1Q8ND90 353 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 OR6J1Q8NGC5 347 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 NSUN6Q8TEA1 469 aaKnown RBP13.49□□□□□ -0.25
GARNL3-217ENST00000481875 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 EMID1Q96A84 441 aaPredicted RBP13.49□□□□□ -0.25
GARNL3-217ENST00000481875 PRDM6Q9NQX0 595 aa13.49□□□□□ -0.25
GARNL3-217ENST00000481875 YBX2Q9Y2T7 364 aaKnown RBP13.49□□□□□ -0.25
GARNL3-217ENST00000481875 NEDD4P46934 1319 aa13.48□□□□□ -0.25
GARNL3-217ENST00000481875 CDC45O75419 566 aa13.48□□□□□ -0.25
GARNL3-217ENST00000481875 PARNO95453 639 aaKnown RBP13.48□□□□□ -0.25
GARNL3-217ENST00000481875 IQCF3P0C7M6 154 aa13.48□□□□□ -0.25
GARNL3-217ENST00000481875 TXNP10599 105 aaKnown RBP13.48□□□□□ -0.25
GARNL3-217ENST00000481875 ATP2A2P16615 1042 aaKnown RBP13.48□□□□□ -0.25
GARNL3-217ENST00000481875 CHMLP26374 656 aa13.48□□□□□ -0.25
GARNL3-217ENST00000481875 RBL2Q08999 1139 aa13.48□□□□□ -0.25
GARNL3-217ENST00000481875 CWC27Q6UX04 472 aaKnown RBP13.48□□□□□ -0.25
GARNL3-217ENST00000481875 SYTL5Q8TDW5 730 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-217ENST00000481875 ZSCAN10Q96SZ4 725 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-217ENST00000481875 ZSWIM5Q9P217 1185 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms