RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 EVA1BQ9NVM1 165 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 ALPK3Q96L96 1907 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 IGKV6D-41A0A0C4DH26 115 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 SNRPBP14678 240 aaKnown RBP10.69□□□□□ -0.7
HLA-B-253ENST00000481849 MX1P20591 662 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 COPB2P35606 906 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 RRP1P56182 461 aaKnown RBP10.69□□□□□ -0.7
HLA-B-253ENST00000481849 SH3BP2P78314 561 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 PDE4BQ07343 736 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 PPARAQ07869 468 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 FAM109BQ6ICB4 259 aaPredicted RBP10.69□□□□□ -0.7
HLA-B-253ENST00000481849 PRPF38AQ8NAV1 312 aaKnown RBP10.69□□□□□ -0.7
HLA-B-253ENST00000481849 CRBNQ96SW2 442 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 ZNF287Q9HBT7 754 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 INCENPQ9NQS7 918 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 HOMER2Q9NSB8 354 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 MTMR4Q9NYA4 1195 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 ZHX1Q9UKY1 873 aaPredicted RBP10.69□□□□□ -0.7
HLA-B-253ENST00000481849 CNPY2Q9Y2B0 182 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 TPRP12270 2363 aaKnown RBP10.69□□□□□ -0.7
HLA-B-253ENST00000481849 A0A0G2JMZ2 1700 aa10.69□□□□□ -0.7
HLA-B-253ENST00000481849 TMEM232C9JQI7 657 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 TTLL1O95922 423 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 SLC3A2P08195 630 aaKnown RBP10.68□□□□□ -0.7
HLA-B-253ENST00000481849 ZNF865P0CJ78 1059 aaPredicted RBP10.68□□□□□ -0.7
HLA-B-253ENST00000481849 AKR1A1P14550 325 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 TFAP4Q01664 338 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 CTDSPL2Q05D32 466 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 IKQ13123 557 aaPredicted RBP10.68□□□□□ -0.7
HLA-B-253ENST00000481849 ZMYM1Q5SVZ6 1142 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 ANKRD45Q5TZF3 282 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 SLFN13Q68D06 897 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 SH3RF1Q7Z6J0 888 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 BADQ92934 168 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 FAM161BQ96MY7 647 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 DIS3Q9Y2L1 958 aaKnown RBP10.68□□□□□ -0.7
HLA-B-253ENST00000481849 GPR179Q6PRD1 2367 aa10.68□□□□□ -0.7
HLA-B-253ENST00000481849 BAZ2AQ9UIF9 1905 aaKnown RBP10.67□□□□□ -0.7
HLA-B-253ENST00000481849 A0A1W2PQ45 241 aaPredicted RBP10.67□□□□□ -0.7
HLA-B-253ENST00000481849 A0A1W2PQY0 241 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 TRIM43BA6NCK2 446 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 SIAH2O43255 324 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 PQBP1O60828 265 aaKnown RBP10.67□□□□□ -0.7
HLA-B-253ENST00000481849 SNAI1O95863 264 aaPredicted RBP10.67□□□□□ -0.7
HLA-B-253ENST00000481849 BMP3P12645 472 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 SNAP25P60880 206 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 TLE2Q04725 743 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 KCNH2Q12809 1159 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 LINC01559Q495D7 138 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 RASGRP2Q7LDG7 609 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 RNF180Q86T96 592 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 ANKRD35Q8N283 1001 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 NEDD1Q8NHV4 660 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 BAP1Q92560 729 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 TRIM43Q96BQ3 446 aaPredicted RBP10.67□□□□□ -0.7
HLA-B-253ENST00000481849 PDLIM7Q9NR12 457 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 NRBP1Q9UHY1 535 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 FEM1BQ9UK73 627 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 STX8Q9UNK0 236 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 PHF24Q9UPV7 400 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 ZNF236Q9UL36 1845 aa10.67□□□□□ -0.7
HLA-B-253ENST00000481849 DCHS1Q96JQ0 3298 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 NMT2O60551 498 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 MCCP23508 829 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 SNX17Q15036 470 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 SHHQ15465 462 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 C9orf50Q5SZB4 431 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 VPS53Q5VIR6 699 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 CCDC174Q6PII3 467 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 GMCL1P1Q8NEA9 526 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 MKL1Q969V6 931 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 YTHDC1Q96MU7 727 aaKnown RBP10.66□□□□□ -0.7
HLA-B-253ENST00000481849 SLC38A10Q9HBR0 1119 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 RLFQ13129 1914 aa10.66□□□□□ -0.7
HLA-B-253ENST00000481849 SYNRGQ9UMZ2 1314 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 DNAJC25-GNG10A0A024R161 153 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 MYADML2A6NDP7 307 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 TSPY2A6NKD2 308 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 FOXP2O15409 715 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
HLA-B-253ENST00000481849 SLC1A4P43007 532 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 CNTN2Q02246 1040 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 DESI1Q6ICB0 168 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 KCTD1Q719H9 257 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 TOMM22Q9NS69 142 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 TACC3Q9Y6A5 838 aa10.65□□□□□ -0.7
HLA-B-253ENST00000481849 DDX49Q9Y6V7 483 aaKnown RBP10.65□□□□□ -0.7
HLA-B-253ENST00000481849 FLNBO75369 2602 aaKnown RBP10.65□□□□□ -0.71
HLA-B-253ENST00000481849 SALL3Q9BXA9 1300 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 ATP2A1O14983 1001 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 TRIM66O15016 1216 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 CAPN5O15484 640 aaPredicted RBP10.64□□□□□ -0.71
HLA-B-253ENST00000481849 ADCY6O43306 1168 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 ADAMTS4O75173 837 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 CLTBP09497 229 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms