RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 PHLDB1Q86UU1 1377 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 KDM5BQ9UGL1 1544 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 FAM86C2PA6NEL3 165 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 FBXW10Q5XX13 1052 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 GALNT18Q6P9A2 607 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 ZC3H14Q6PJT7 736 aaKnown RBP3.61□□□□□ -1.83
USH2A-204ENST00000481786 CCDC81Q6ZN84 652 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 RUFY4Q6ZNE9 571 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 SLCO6A1Q86UG4 719 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 CARFQ8N187 725 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 ZNF428Q96B54 188 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 DHRS1Q96LJ7 313 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 SAMD11Q96NU1 681 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 SSBP3Q9BWW4 388 aaPredicted RBP3.61□□□□□ -1.83
USH2A-204ENST00000481786 TGIF2Q9GZN2 237 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 ASCC2Q9H1I8 757 aaPredicted RBP3.61□□□□□ -1.83
USH2A-204ENST00000481786 ACBD3Q9H3P7 528 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 IMPACTQ9P2X3 320 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 SUCOQ9UBS9 1254 aaKnown RBP3.61□□□□□ -1.83
USH2A-204ENST00000481786 HS3ST3A1Q9Y663 406 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 TAF6LQ9Y6J9 622 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 TNIKQ9UKE5 1360 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 WRNQ14191 1432 aaPredicted RBP eCLIP3.61□□□□□ -1.83
USH2A-204ENST00000481786 POGZQ7Z3K3 1410 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 UACAQ9BZF9 1416 aa3.61□□□□□ -1.83
USH2A-204ENST00000481786 WDR7Q9Y4E6 1490 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 CFAP43Q8NDM7 1665 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 SSU72P8A0A1W2PR75 194 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 WTIPA6NIX2 430 aaPredicted RBP3.6□□□□□ -1.83
USH2A-204ENST00000481786 C9IYK1 514 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 SHOXO15266 292 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 SIGLEC6O43699 453 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 PRAMEF1O95521 474 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 AMHP03971 560 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 PFKLP17858 780 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 GUCY2CP25092 1073 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 ARL4AP40617 200 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 GIPRP48546 466 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 MAPKAPK2P49137 400 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 PMS1P54277 932 aaKnown RBP3.6□□□□□ -1.83
USH2A-204ENST00000481786 PCBP3P57721 371 aaKnown RBP3.6□□□□□ -1.83
USH2A-204ENST00000481786 LAPTM5Q13571 262 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 AUHQ13825 339 aaKnown RBP3.6□□□□□ -1.83
USH2A-204ENST00000481786 ZYXQ15942 572 aaKnown RBP3.6□□□□□ -1.83
USH2A-204ENST00000481786 UNC5AQ6ZN44 842 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 LIMS2Q7Z4I7 341 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 PPFIBP1Q86W92 1011 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 ZNF655Q8N720 491 aaPredicted RBP3.6□□□□□ -1.83
USH2A-204ENST00000481786 LINC00116Q8NCU8 138 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 TMEM52Q8NDY8 209 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 JMJD8Q96S16 334 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 MKRN2Q9H000 416 aaKnown RBP3.6□□□□□ -1.83
USH2A-204ENST00000481786 ERVK13-1Q9NX77 482 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 TNFRSF10DQ9UBN6 386 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 ACSL6Q9UKU0 697 aa3.6□□□□□ -1.83
USH2A-204ENST00000481786 CTSKP43235 329 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 NASPP49321 788 aaPredicted RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 EIF6P56537 245 aaKnown RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 GJA9P57773 515 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 MVKQ03426 396 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 HNRNPA0Q13151 305 aaKnown RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 ANKRD39Q53RE8 183 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 AXDND1Q5T1B0 1012 aaPredicted RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 TDRD10Q5VZ19 366 aaKnown RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 ZNF761Q86XN6 746 aaPredicted RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 C7orf61Q8IZ16 206 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 TTC9BQ8N6N2 239 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 DVL3Q92997 716 aaPredicted RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 SHDQ96IW2 340 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 SEC16BQ96JE7 1060 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 FCRL2Q96LA5 508 aaPredicted RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 NOX5Q96PH1 765 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 CRBNQ96SW2 442 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 BCAS3Q9H6U6 928 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 CHST7Q9NS84 486 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 SPATA6Q9NWH7 488 aaPredicted RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 GFOD1Q9NXC2 390 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 PRR13Q9NZ81 148 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 FBXL21Q9UKT6 434 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 ZNF214Q9UL59 606 aaPredicted RBP3.59□□□□□ -1.83
USH2A-204ENST00000481786 PCDHB12Q9Y5F1 795 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 LTBP3Q9NS15 1303 aa3.59□□□□□ -1.83
USH2A-204ENST00000481786 UHRF1BP1Q6BDS2 1440 aa3.59□□□□□ -1.84
USH2A-204ENST00000481786 RIMS1Q86UR5 1692 aaKnown RBP3.59□□□□□ -1.84
USH2A-204ENST00000481786 MEIS1O00470 390 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 TOM1O60784 492 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 RAPGEF3O95398 923 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 PLATP00750 562 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 TCF3P15923 654 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 TMEM62Q0P6H9 643 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 CCDC144CPQ8IYA2 1237 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 C19orf47Q8N9M1 422 aaKnown RBP3.58□□□□□ -1.84
USH2A-204ENST00000481786 CHST13Q8NET6 341 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 OR6P1Q8NGX9 317 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 SMARCC1Q92922 1105 aaPredicted RBP3.58□□□□□ -1.84
USH2A-204ENST00000481786 SRRTQ9BXP5 876 aaKnown RBP3.58□□□□□ -1.84
USH2A-204ENST00000481786 VPS11Q9H270 941 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 CCSER2Q9H7U1 834 aa3.58□□□□□ -1.84
USH2A-204ENST00000481786 RGS17Q9UGC6 210 aaPredicted RBP3.58□□□□□ -1.84
USH2A-204ENST00000481786 INPP5FQ9Y2H2 1132 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms