RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 GPNMBQ14956 572 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 PPP2R5BQ15173 497 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 TTBK2Q6IQ55 1244 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 BTNL9Q6UXG8 535 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 SLC30A10Q6XR72 485 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 GPATCH3Q96I76 525 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 INCENPQ9NQS7 918 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 LMCD1Q9NZU5 365 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 MTMR7Q9Y216 660 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 EDNRBP24530 442 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 SLC16A2P36021 539 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 WDR5P61964 334 aaKnown RBP20.51■□□□□ 0.87
RXRB-203ENST00000481441 CCDC96Q2M329 555 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 LRRFIP1Q32MZ4 808 aaKnown RBP20.51■□□□□ 0.87
RXRB-203ENST00000481441 GDPD5Q8WTR4 605 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 SCFD2Q8WU76 684 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 DCAF4Q8WV16 495 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 CLEC4DQ8WXI8 215 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 COPS5Q92905 334 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 CTAGE1Q96RT6 745 aa20.51■□□□□ 0.87
RXRB-203ENST00000481441 FOXP2O15409 715 aa20.5■□□□□ 0.87
RXRB-203ENST00000481441 CALML3P27482 149 aa20.5■□□□□ 0.87
RXRB-203ENST00000481441 TMCO2Q7Z6W1 182 aaPredicted RBP20.5■□□□□ 0.87
RXRB-203ENST00000481441 NOD1Q9Y239 953 aa20.5■□□□□ 0.87
RXRB-203ENST00000481441 SIP14410 1827 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 CTDSPL2Q05D32 466 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 PDE4DQ08499 809 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 PTGISQ16647 500 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 ZMYM1Q5SVZ6 1142 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 SYDE2Q5VT97 1194 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 RNF207Q6ZRF8 634 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 CAGE1Q8TC20 777 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 AFAP1L1Q8TED9 768 aa20.49■□□□□ 0.87
RXRB-203ENST00000481441 TXNP10599 105 aaKnown RBP20.48■□□□□ 0.87
RXRB-203ENST00000481441 DEFB103AP81534 67 aa20.48■□□□□ 0.87
RXRB-203ENST00000481441 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
RXRB-203ENST00000481441 UBE2ZQ9H832 354 aaPredicted RBP20.48■□□□□ 0.87
RXRB-203ENST00000481441 SUGCTQ9HAC7 445 aa20.48■□□□□ 0.87
RXRB-203ENST00000481441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.47■□□□□ 0.87
RXRB-203ENST00000481441 ARIH2O95376 493 aa20.47■□□□□ 0.87
RXRB-203ENST00000481441 RPS6P62753 249 aaKnown RBP20.47■□□□□ 0.87
RXRB-203ENST00000481441 SESTD1Q86VW0 696 aa20.47■□□□□ 0.87
RXRB-203ENST00000481441 CCDC155Q8N6L0 562 aa20.47■□□□□ 0.87
RXRB-203ENST00000481441 DNERQ8NFT8 737 aa20.47■□□□□ 0.87
RXRB-203ENST00000481441 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
RXRB-203ENST00000481441 ZBED2Q9BTP6 218 aa20.47■□□□□ 0.87
RXRB-203ENST00000481441 RANBP6O60518 1105 aaKnown RBP20.46■□□□□ 0.87
RXRB-203ENST00000481441 GJB5O95377 273 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 CXCL10P02778 98 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 SELPP16109 830 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 ERVK-21P61565 698 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 RBL2Q08999 1139 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 TCTN1Q2MV58 587 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 GDF6Q6KF10 455 aaPredicted RBP20.46■□□□□ 0.87
RXRB-203ENST00000481441 CNKSR3Q6P9H4 555 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 LRRC8DQ7L1W4 858 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 FAM178BQ8IXR5 827 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 DHX38Q92620 1227 aaKnown RBP20.46■□□□□ 0.87
RXRB-203ENST00000481441 MPHOSPH6Q99547 160 aaKnown RBP20.46■□□□□ 0.87
RXRB-203ENST00000481441 GPCPD1Q9NPB8 672 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 ANAPC4Q9UJX5 808 aa20.46■□□□□ 0.87
RXRB-203ENST00000481441 FRMPD2Q68DX3 1309 aaPredicted RBP20.45■□□□□ 0.86
RXRB-203ENST00000481441 LINC01553A4QN01 128 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 PRR33A8MZF0 331 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 ORC4O43929 436 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 FGRP09769 529 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 CHMP4BP1P59074 171 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 LEXMQ3ZCV2 418 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 GJD3Q8N144 294 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 TGS1Q96RS0 853 aaKnown RBP20.45■□□□□ 0.86
RXRB-203ENST00000481441 RAD9AQ99638 391 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 TMEM47Q9BQJ4 181 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 PNMA2Q9UL42 364 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 MTUS1Q9ULD2 1270 aa20.45■□□□□ 0.86
RXRB-203ENST00000481441 NBNO60934 754 aa20.44■□□□□ 0.86
RXRB-203ENST00000481441 PARNO95453 639 aaKnown RBP20.44■□□□□ 0.86
RXRB-203ENST00000481441 TOP1P11387 765 aaKnown RBP20.44■□□□□ 0.86
RXRB-203ENST00000481441 CCDC62Q6P9F0 684 aa20.44■□□□□ 0.86
RXRB-203ENST00000481441 ALYREFQ86V81 257 aaKnown RBP20.44■□□□□ 0.86
RXRB-203ENST00000481441 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.44■□□□□ 0.86
RXRB-203ENST00000481441 PI4K2BQ8TCG2 481 aa20.44■□□□□ 0.86
RXRB-203ENST00000481441 AFG1LQ8WV93 481 aa20.44■□□□□ 0.86
RXRB-203ENST00000481441 KAT2BQ92831 832 aa20.44■□□□□ 0.86
RXRB-203ENST00000481441 FSD1Q9BTV5 496 aa20.44■□□□□ 0.86
RXRB-203ENST00000481441 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
RXRB-203ENST00000481441 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
RXRB-203ENST00000481441 KIAA1217Q5T5P2 1943 aa20.43■□□□□ 0.86
RXRB-203ENST00000481441 ABHD14A-ACY1A0A1B0GW23 586 aa20.43■□□□□ 0.86
RXRB-203ENST00000481441 MMP3P08254 477 aa20.43■□□□□ 0.86
RXRB-203ENST00000481441 C20orf194Q5TEA3 1177 aa20.43■□□□□ 0.86
RXRB-203ENST00000481441 B4DLN1 442 aa20.42■□□□□ 0.86
RXRB-203ENST00000481441 PDHBP11177 359 aa20.42■□□□□ 0.86
RXRB-203ENST00000481441 CKBP12277 381 aa20.42■□□□□ 0.86
RXRB-203ENST00000481441 KCNA5P22460 613 aa20.42■□□□□ 0.86
RXRB-203ENST00000481441 MRPL12P52815 198 aaKnown RBP20.42■□□□□ 0.86
RXRB-203ENST00000481441 ARHGAP1Q07960 439 aa20.42■□□□□ 0.86
RXRB-203ENST00000481441 IL9P15248 144 aa20.41■□□□□ 0.86
RXRB-203ENST00000481441 VPS53Q5VIR6 699 aa20.41■□□□□ 0.86
RXRB-203ENST00000481441 TCP11L1Q9NUJ3 509 aa20.41■□□□□ 0.86
RXRB-203ENST00000481441 GTF2IRD1Q9UHL9 959 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms