RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 SCFD2Q8WU76 684 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 RRP36Q96EU6 259 aaKnown RBP15.1■□□□□ 0.01
HDAC1-207ENST00000481281 IWS1Q96ST2 819 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 RMDN3Q96TC7 470 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 WDR11Q9BZH6 1224 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 STARD7Q9NQZ5 370 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
HDAC1-207ENST00000481281 BRPF3Q9ULD4 1205 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 ATP11BQ9Y2G3 1177 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 DNAH12Q6ZR08 3092 aa15.1■□□□□ 0.01
HDAC1-207ENST00000481281 BEX3Q00994 111 aa15.09■□□□□ 0.01
HDAC1-207ENST00000481281 FSCN1Q16658 493 aaKnown RBP15.09■□□□□ 0.01
HDAC1-207ENST00000481281 GLT1D1Q96MS3 346 aa15.09■□□□□ 0.01
HDAC1-207ENST00000481281 JAKMIP1Q96N16 626 aaKnown RBP15.09■□□□□ 0.01
HDAC1-207ENST00000481281 AP5M1Q9H0R1 490 aa15.09■□□□□ 0.01
HDAC1-207ENST00000481281 PXMP2Q9NR77 195 aa15.09■□□□□ 0.01
HDAC1-207ENST00000481281 ELP1O95163 1332 aa15.09■□□□□ 0.01
HDAC1-207ENST00000481281 A0A1W2PPC1 479 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 DYNC1LI2O43237 492 aaPredicted RBP15.08■□□□□ 0
HDAC1-207ENST00000481281 CPA1P15085 419 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 EIF2AK2P19525 551 aaKnown RBP15.08■□□□□ 0
HDAC1-207ENST00000481281 HOXA13P31271 388 aaPredicted RBP15.08■□□□□ 0
HDAC1-207ENST00000481281 BMP8BP34820 402 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 MAGEA10P43363 369 aaPredicted RBP15.08■□□□□ 0
HDAC1-207ENST00000481281 RCAN1P53805 252 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 TLE2Q04725 743 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 PPP2R5BQ15173 497 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 ARHGEF16Q5VV41 709 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 SYNE3Q6ZMZ3 975 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 ANKRD33Q7Z3H0 272 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 CMTR1Q8N1G2 835 aaKnown RBP15.08■□□□□ 0
HDAC1-207ENST00000481281 FBXL16Q8N461 479 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 PIBF1Q8WXW3 757 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 PDLIM7Q9NR12 457 aa15.08■□□□□ 0
HDAC1-207ENST00000481281 SEC63Q9UGP8 760 aaKnown RBP15.08■□□□□ 0
HDAC1-207ENST00000481281 GCOM1H8Y6P7 765 aaPredicted RBP15.07■□□□□ 0
HDAC1-207ENST00000481281 NKRFO15226 690 aaKnown RBP eCLIP15.07■□□□□ 0
HDAC1-207ENST00000481281 ZBTB43O43298 467 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 ARIH2O95376 493 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 NR3C2P08235 984 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 POLR2MP0CAP2 368 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 STXBP2Q15833 593 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 CCDC62Q6P9F0 684 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 TOX2Q96NM4 488 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 PDCD2LQ9BRP1 358 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 USP26Q9BXU7 913 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 AGXT2Q9BYV1 514 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 RBM28Q9NW13 759 aaKnown RBP15.07■□□□□ 0
HDAC1-207ENST00000481281 PCDH10Q9P2E7 1040 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 FRMPD4Q14CM0 1322 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 CNTNAP5Q8WYK1 1306 aa15.07■□□□□ 0
HDAC1-207ENST00000481281 RANBP2P49792 3224 aaKnown RBP15.06■□□□□ 0
HDAC1-207ENST00000481281 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
HDAC1-207ENST00000481281 KLF18A0A0U1RQI7 1052 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 EIF3JO75822 258 aaKnown RBP15.06■□□□□ 0
HDAC1-207ENST00000481281 CABYRO75952 493 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 TXNP10599 105 aaKnown RBP15.06■□□□□ 0
HDAC1-207ENST00000481281 RPS6KB1P23443 525 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 CDK7P50613 346 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 FUT2Q10981 343 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 TTLL4Q14679 1199 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 RTN1Q16799 776 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 CXCL17Q6UXB2 119 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 NID2Q14112 1375 aa15.06■□□□□ 0
HDAC1-207ENST00000481281 PIK3CDO00329 1044 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 ZEB2O60315 1214 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 PQBP1O60828 265 aaKnown RBP15.05■□□□□ -0
HDAC1-207ENST00000481281 CLTBP09497 229 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 PSMA5P28066 241 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 CPT1AP50416 773 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 FXR1P51114 621 aaKnown RBP eCLIP15.05■□□□□ -0
HDAC1-207ENST00000481281 PGM5Q15124 567 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 Q6ZUG5 572 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 SH3RF1Q7Z6J0 888 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 VSIG10LQ86VR7 867 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 CCDC82Q8N4S0 544 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 OR6J1Q8NGC5 347 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 IL31RAQ8NI17 732 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 COPS5Q92905 334 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 FAM217BQ9NTX9 383 aaPredicted RBP15.05■□□□□ -0
HDAC1-207ENST00000481281 PRKAG2Q9UGJ0 569 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 MROH7Q68CQ1 1323 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 SCN10AQ9Y5Y9 1956 aa15.05■□□□□ -0
HDAC1-207ENST00000481281 hCG_1642624A0A1W2PR95 340 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 TRIM43BA6NCK2 446 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 A6NJR5 290 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 GOLGA8AA7E2F4 631 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 GOLGA8BA8MQT2 603 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 ARVCFO00192 962 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 MEIS2O14770 477 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 KIAA0355O15063 1070 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 RGS20O76081 388 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 CASTP20810 708 aaKnown RBP15.04■□□□□ -0
HDAC1-207ENST00000481281 CDC27P30260 824 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 FGD1P98174 961 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 MDM2Q00987 491 aaPredicted RBP15.04■□□□□ -0
HDAC1-207ENST00000481281 FAAP100Q0VG06 881 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 SEPT14Q6ZU15 432 aa15.04■□□□□ -0
HDAC1-207ENST00000481281 FCHSD1Q86WN1 690 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms