RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PTRH1Q86Y79 214 aaKnown RBP9.47□□□□□ -0.89
LSM5-210ENST00000480956 CLRN3Q8NCR9 226 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 DIO2Q92813 273 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 DDX11Q96FC9 970 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 APOL5Q9BWW9 433 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 LGR4Q9BXB1 951 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 CDC23Q9UJX2 597 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 POLHQ9Y253 713 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 ZKSCAN5Q9Y2L8 839 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 ANKRD18BA2A2Z9 1011 aa9.46□□□□□ -0.89
LSM5-210ENST00000480956 LMBRD2Q68DH5 695 aaPredicted RBP9.46□□□□□ -0.89
LSM5-210ENST00000480956 KRT25Q7Z3Z0 450 aa9.46□□□□□ -0.89
LSM5-210ENST00000480956 LMNTD2Q8IXW0 634 aa9.46□□□□□ -0.89
LSM5-210ENST00000480956 ATP6V1E2Q96A05 226 aa9.46□□□□□ -0.89
LSM5-210ENST00000480956 CD248Q9HCU0 757 aa9.46□□□□□ -0.89
LSM5-210ENST00000480956 SPTLC3Q9NUV7 552 aa9.46□□□□□ -0.89
LSM5-210ENST00000480956 GPRC5BQ9NZH0 403 aa9.46□□□□□ -0.89
LSM5-210ENST00000480956 ZNF652Q9Y2D9 606 aa9.46□□□□□ -0.89
LSM5-210ENST00000480956 BLACEA4D250 179 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 CBX4O00257 560 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 TIPRLO75663 272 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 CAPNS1P04632 268 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 HOXD12P35452 270 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 HYAL2Q12891 473 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 CLUL1Q15846 466 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 DGKKQ5KSL6 1271 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 ITPRIPL1Q6GPH6 555 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 PDZD4Q76G19 769 aaPredicted RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 MAMDC2Q7Z304 686 aaPredicted RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 LSMEM1Q8N8F7 131 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 TMEM102Q8N9M5 508 aaPredicted RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 NXPE3Q969Y0 559 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 ZIC5Q96T25 663 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 ATP6V0A4Q9HBG4 840 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 ANKEF1Q9NU02 776 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 APEX2Q9UBZ4 518 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 FAM227AF5H4B4 570 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 DNAJA2O60884 412 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 CRTAMO95727 393 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 TIMP2P16035 220 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 ATP4AP20648 1035 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 ABCB4P21439 1286 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 PIK3CAP42336 1068 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 CDK8P49336 464 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 GRM1Q13255 1194 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 PKDCCQ504Y2 493 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 DARS2Q6PI48 645 aaKnown RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 DPP9Q86TI2 863 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 DIS3LQ8TF46 1054 aaKnown RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 USP13Q92995 863 aaPredicted RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 TEKT5Q96M29 485 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 AGBL1Q96MI9 1066 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 BARD1Q99728 777 aaKnown RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 HAUS7Q99871 368 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 PDGFDQ9GZP0 370 aaPredicted RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 TOPORSQ9NS56 1045 aaPredicted RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 THG1LQ9NWX6 298 aaKnown RBP9.45□□□□□ -0.9
LSM5-210ENST00000480956 WASF2Q9Y6W5 498 aa9.45□□□□□ -0.9
LSM5-210ENST00000480956 AREL1O15033 823 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 GLRX3O76003 335 aaKnown RBP9.44□□□□□ -0.9
LSM5-210ENST00000480956 SOD2P04179 222 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 PLCG1P19174 1290 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 TARSP26639 723 aaKnown RBP9.44□□□□□ -0.9
LSM5-210ENST00000480956 PHKA2P46019 1235 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 LRRC32Q14392 662 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 ACAP2Q15057 778 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 ATAT1Q5SQI0 421 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 GPATCH4Q5T3I0 446 aaKnown RBP9.44□□□□□ -0.9
LSM5-210ENST00000480956 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
LSM5-210ENST00000480956 Q6ZNB5 142 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 OVCH2Q7RTZ1 564 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 FTSJ3Q8IY81 847 aaKnown RBP9.44□□□□□ -0.9
LSM5-210ENST00000480956 CEP120Q8N960 986 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 IPO4Q8TEX9 1081 aaKnown RBP9.44□□□□□ -0.9
LSM5-210ENST00000480956 FERMT2Q96AC1 680 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 ITPKCQ96DU7 683 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 DHRS1Q96LJ7 313 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 GRIP2Q9C0E4 1043 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 CLEC4MQ9H2X3 399 aaPredicted RBP9.44□□□□□ -0.9
LSM5-210ENST00000480956 PLEKHA5Q9HAU0 1116 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 ODF2LQ9ULJ1 636 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 CCDC180Q9P1Z9 1646 aa9.44□□□□□ -0.9
LSM5-210ENST00000480956 SYNDIG1LA6NDD5 238 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 TBX1O43435 398 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 DLX3O60479 287 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 VAMP4O75379 141 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 HOXC13P31276 330 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 KRT9P35527 623 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 BLMHQ13867 455 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 SLC6A19Q695T7 634 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 COLGALT2Q8IYK4 626 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 C7orf61Q8IZ16 206 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 CRIPAKQ8N1N5 446 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 CCDC47Q96A33 483 aaKnown RBP9.43□□□□□ -0.9
LSM5-210ENST00000480956 HVCN1Q96D96 273 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 ZMAT2Q96NC0 199 aaKnown RBP9.43□□□□□ -0.9
LSM5-210ENST00000480956 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 CERS4Q9HA82 394 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 BRD7Q9NPI1 651 aa9.43□□□□□ -0.9
LSM5-210ENST00000480956 NKIRAS2Q9NYR9 191 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms